RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CCDC51Q96ER9 411 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 BABAM1Q9NWV8 329 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 MTUS1Q9ULD2 1270 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 KIF5AQ12840 1032 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 CEP250Q9BV73 2442 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 KIF24Q5T7B8 1368 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 PIK3C2GO75747 1445 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 CDK13Q14004 1512 aaKnown RBP5.92□□□□□ -1.46
CSMD3-204ENST00000455883 OTUD6BQ8N6M0 293 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 LLPHQ9BRT6 129 aaKnown RBP5.92□□□□□ -1.46
CSMD3-204ENST00000455883 STK26Q9P289 416 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 CDC42BPAQ5VT25 1732 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 MCTP2Q6DN12 878 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 PHLDB3Q6NSJ2 640 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 TMOD4Q9NZQ9 345 aa5.92□□□□□ -1.46
CSMD3-204ENST00000455883 CASQ2O14958 399 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 LGSNQ5TDP6 509 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC129Q6ZRS4 1044 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 IQCA1Q86XH1 822 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 FAM76AQ8TAV0 307 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 ZNF652Q9Y2D9 606 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 UBE4BO95155 1302 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 NUTM2DQ5VT03 806 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 NUTM2AQ8IVF1 878 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 KIRREL3Q8IZU9 778 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 ZGPATQ8N5A5 531 aaKnown RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 RAB3IL1Q8TBN0 382 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC84Q86UT8 332 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 TAX1BP1Q86VP1 789 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC26Q8TAB7 109 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 TTF2Q9UNY4 1162 aaKnown RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 TTC41PQ6P2S7 1318 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CCDC102BQ68D86 513 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 ANKRD36BQ8N2N9 1353 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 EIF3CLB5ME19 914 aaKnown RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 ZNF165P49910 485 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 PSME1Q06323 249 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 SYCE1Q8N0S2 351 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 EIF3CQ99613 913 aaKnown RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 NUP58Q9BVL2 599 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 TSPYL4Q9UJ04 414 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 NAA16Q6N069 864 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 MYCBPQ99417 103 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 SSX2IPQ9Y2D8 614 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 LMNB1P20700 586 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 PPP2R5AQ15172 486 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 SMARCC2Q8TAQ2 1214 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CIB2O75838 187 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 PSMD7P51665 324 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 DTNBP1Q96EV8 351 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 JAKMIP1Q96N16 626 aaKnown RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 KIF2CQ99661 725 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 TEX13AQ9BXU3 409 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 LAMC1P11047 1609 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 PSMA7O14818 248 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 GNAT2P19087 354 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 MAN1A1P33908 653 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 BRD3Q15059 726 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 FYB2Q5VWT5 728 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 KCNH5Q8NCM2 988 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CALML4Q96GE6 196 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 BCL2L13Q9BXK5 485 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 DAAM1Q9Y4D1 1078 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 KIAA0586Q9BVV6 1533 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CALM1P0DP23 149 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CALM2P0DP24 149 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 CALM3P0DP25 149 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 RILPL1Q5EBL4 403 aa5.91□□□□□ -1.46
CSMD3-204ENST00000455883 NUP88Q99567 741 aaPredicted RBP5.91□□□□□ -1.46
CSMD3-204ENST00000455883 APBB1O00213 710 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 EVCP57679 992 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 TPRNQ4KMQ1 711 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 ATP2A3Q93084 1043 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 EVI5LQ96CN4 794 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 HVCN1Q96D96 273 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 FAM81BQ96LP2 452 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 TUBB6Q9BUF5 446 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 MAGEF1Q9HAY2 307 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 POTEB3A0JP26 581 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 MX1P20591 662 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 ZNF131P52739 623 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 RIPPLY1Q0D2K3 151 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 POTEBQ6S5H4 581 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 HOMER2Q9NSB8 354 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 KIAA0100Q14667 2235 aaKnown RBP5.9□□□□□ -1.46
CSMD3-204ENST00000455883 HEATR1Q9H583 2144 aaKnown RBP5.9□□□□□ -1.46
CSMD3-204ENST00000455883 GAS8O95995 478 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 ZNF853P0CG23 659 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 MIS12Q9H081 205 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 PDRG1Q9NUG6 133 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 CAMSAP1Q5T5Y3 1602 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 TBC1D32Q96NH3 1257 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 RNF14Q9UBS8 474 aa5.9□□□□□ -1.46
CSMD3-204ENST00000455883 MAIP1Q8WWC4 291 aa5.9□□□□□ -1.47
CSMD3-204ENST00000455883 SYNMO15061 1565 aa5.9□□□□□ -1.47
CSMD3-204ENST00000455883 MAST1Q9Y2H9 1570 aa5.9□□□□□ -1.47
CSMD3-204ENST00000455883 VTI1AQ96AJ9 217 aa5.9□□□□□ -1.47
CSMD3-204ENST00000455883 C8orf76Q96K31 380 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms