RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 CT47A1Q5JQC4 288 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-203ENST00000454498 KLHL10Q6JEL2 608 aa11.66□□□□□ -0.54
CSGALNACT1-203ENST00000454498 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-203ENST00000454498 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
CSGALNACT1-203ENST00000454498 USP25Q9UHP3 1055 aa11.66□□□□□ -0.54
CSGALNACT1-203ENST00000454498 GNPATO15228 680 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 CHST3Q7LGC8 479 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 ZSCAN30Q86W11 494 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 KAT14Q9H8E8 782 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 CNNM2Q9H8M5 875 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 RTL1A6NKG5 1358 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 PRC1O43663 620 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 ITGA6P23229 1130 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 TMTC2Q8N394 836 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 ERVV-2B6SEH9 535 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 CPA1P15085 419 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 PARP10Q53GL7 1025 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 TANGO6Q9C0B7 1094 aa11.65□□□□□ -0.54
CSGALNACT1-203ENST00000454498 DHX32Q7L7V1 743 aaKnown RBP11.65□□□□□ -0.55
CSGALNACT1-203ENST00000454498 SGSM2O43147 1006 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 SSH3Q8TE77 659 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 PANK2Q9BZ23 570 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 VAT1LQ9HCJ6 419 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CLTCL1P53675 1640 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 NEURL1BA8MQ27 555 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 MIGA1Q8NAN2 632 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ALG1Q9BT22 464 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 KIF24Q5T7B8 1368 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 BIN1O00499 593 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ZNF165P49910 485 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 MAGEB6Q8N7X4 407 aa11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 INTS4Q96HW7 963 aaKnown RBP11.64□□□□□ -0.55
CSGALNACT1-203ENST00000454498 GSTO1P78417 241 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 RTN1Q16799 776 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 AOX1Q06278 1338 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 PDE8AO60658 829 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 F13A1P00488 732 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 DNM1Q05193 864 aaKnown RBP11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 RAB3GAP1Q15042 981 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 FAM177A1Q8N128 213 aaPredicted RBP11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 FAM227BQ96M60 508 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 TFCP2L1Q9NZI6 479 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 MAP3K4Q9Y6R4 1608 aa11.63□□□□□ -0.55
CSGALNACT1-203ENST00000454498 HLA-DOAP06340 250 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 IFIT1BQ5T764 474 aaKnown RBP11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 GIMAP6Q6P9H5 292 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CAGE1Q8TC20 777 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CCNL1Q9UK58 526 aaPredicted RBP11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 F8W031 263 aaPredicted RBP11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 SFPQP23246 707 aaKnown RBP eCLIP11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 APOBRQ0VD83 1088 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 USP48Q86UV5 1035 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 RAB34Q9BZG1 259 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 DEF6Q9H4E7 631 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CCDC87Q9NVE4 849 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CDC42BPBQ9Y5S2 1711 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 BEND3Q5T5X7 828 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 RNF17Q9BXT8 1623 aaKnown RBP11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 UNC13BO14795 1591 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ZNF853P0CG23 659 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 GNAT2P19087 354 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 TCIRG1Q13488 830 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ZSCAN23Q3MJ62 389 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 KBTBD3Q8NAB2 608 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CCDC12Q8WUD4 166 aaPredicted RBP11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 XAGE2Q96GT9 111 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 NDUFB9Q9Y6M9 179 aa11.62□□□□□ -0.55
CSGALNACT1-203ENST00000454498 TMEM132AQ24JP5 1023 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ERBB3P21860 1342 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 EIF5P55010 431 aaKnown RBP11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 TRAPPC3LQ5T215 181 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 UBA7P41226 1012 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 CCDC102BQ68D86 513 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 JAG2Q9Y219 1238 aa11.61□□□□□ -0.55
CSGALNACT1-203ENST00000454498 SYT1P21579 422 aa11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 PUM3Q15397 648 aaKnown RBP11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ZFYVE27Q5T4F4 411 aa11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ZNF804AQ7Z570 1209 aa11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 MBD4O95243 580 aa11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ODF2Q5BJF6 829 aa11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 NOM1Q5C9Z4 860 aaKnown RBP11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 ANKRD2Q9GZV1 360 aa11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 MCM9Q9NXL9 1143 aa11.6□□□□□ -0.55
CSGALNACT1-203ENST00000454498 DACT1Q9NYF0 836 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms