RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 METTL24Q5JXM2 366 aa25.75■■□□□ 1.71
SH3D21-201ENST00000453908 MCMDC2Q4G0Z9 681 aa25.75■■□□□ 1.71
SH3D21-201ENST00000453908 ANKRD18BA2A2Z9 1011 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 HCLS1P14317 486 aaPredicted RBP25.74■■□□□ 1.71
SH3D21-201ENST00000453908 SUSD4Q5VX71 490 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 TM6SF1Q9BZW5 370 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 CNNM1Q9NRU3 951 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 TTC39AQ5SRH9 613 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 VPS53Q5VIR6 699 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 RNF20Q5VTR2 975 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 AKAP2Q9Y2D5 859 aa25.74■■□□□ 1.71
SH3D21-201ENST00000453908 MYH14Q7Z406 1995 aaKnown RBP25.73■■□□□ 1.71
SH3D21-201ENST00000453908 PDE8AO60658 829 aa25.73■■□□□ 1.71
SH3D21-201ENST00000453908 RIPOR2Q9Y4F9 1068 aa25.73■■□□□ 1.71
SH3D21-201ENST00000453908 RIC1Q4ADV7 1423 aa25.73■■□□□ 1.71
SH3D21-201ENST00000453908 SCARF1Q14162 830 aa25.73■■□□□ 1.71
SH3D21-201ENST00000453908 CCDC158Q5M9N0 1113 aa25.73■■□□□ 1.71
SH3D21-201ENST00000453908 PTF1AQ7RTS3 328 aa25.73■■□□□ 1.71
SH3D21-201ENST00000453908 FBXO3Q9UK99 471 aa25.73■■□□□ 1.71
SH3D21-201ENST00000453908 BCL9LQ86UU0 1499 aa25.72■■□□□ 1.71
SH3D21-201ENST00000453908 RPAP1Q9BWH6 1393 aaPredicted RBP25.72■■□□□ 1.71
SH3D21-201ENST00000453908 JCADQ9P266 1359 aa25.72■■□□□ 1.71
SH3D21-201ENST00000453908 FOXD4L6Q3SYB3 417 aaPredicted RBP25.72■■□□□ 1.71
SH3D21-201ENST00000453908 FOXD4L3Q6VB84 417 aaPredicted RBP25.72■■□□□ 1.71
SH3D21-201ENST00000453908 RFX7Q2KHR2 1363 aa25.72■■□□□ 1.71
SH3D21-201ENST00000453908 PI16Q6UXB8 463 aa25.72■■□□□ 1.71
SH3D21-201ENST00000453908 BRD1O95696 1058 aa25.71■■□□□ 1.71
SH3D21-201ENST00000453908 CCDC83Q8IWF9 413 aa25.71■■□□□ 1.71
SH3D21-201ENST00000453908 CAMTA2O94983 1202 aa25.71■■□□□ 1.71
SH3D21-201ENST00000453908 ATP2B3Q16720 1220 aa25.71■■□□□ 1.71
SH3D21-201ENST00000453908 DDX49Q9Y6V7 483 aaKnown RBP25.7■■□□□ 1.7
SH3D21-201ENST00000453908 MYH3P11055 1940 aa25.7■■□□□ 1.7
SH3D21-201ENST00000453908 FAM182BQ5T319 152 aa25.69■■□□□ 1.7
SH3D21-201ENST00000453908 BLOC1S2Q6QNY1 142 aa25.69■■□□□ 1.7
SH3D21-201ENST00000453908 PSMA5P28066 241 aa25.69■■□□□ 1.7
SH3D21-201ENST00000453908 VPS72Q15906 364 aa25.69■■□□□ 1.7
SH3D21-201ENST00000453908 SMIM5Q71RC9 77 aa25.69■■□□□ 1.7
SH3D21-201ENST00000453908 SH3TC1Q8TE82 1336 aa25.69■■□□□ 1.7
SH3D21-201ENST00000453908 SKOR2Q2VWA4 1001 aaPredicted RBP25.68■■□□□ 1.7
SH3D21-201ENST00000453908 USPL1Q5W0Q7 1092 aa25.68■■□□□ 1.7
SH3D21-201ENST00000453908 NECAB1Q8N987 351 aa25.68■■□□□ 1.7
SH3D21-201ENST00000453908 HELBQ8NG08 1087 aaPredicted RBP25.68■■□□□ 1.7
SH3D21-201ENST00000453908 NIP7Q9Y221 180 aaKnown RBP eCLIP25.68■■□□□ 1.7
SH3D21-201ENST00000453908 PRPF40AO75400 957 aaKnown RBP25.68■■□□□ 1.7
SH3D21-201ENST00000453908 PTMSP20962 102 aa25.68■■□□□ 1.7
SH3D21-201ENST00000453908 ME3Q16798 604 aa25.68■■□□□ 1.7
SH3D21-201ENST00000453908 LMBRD1Q9NUN5 540 aa25.68■■□□□ 1.7
SH3D21-201ENST00000453908 TPCN1Q9ULQ1 816 aa25.68■■□□□ 1.7
SH3D21-201ENST00000453908 ZAP70P43403 619 aa25.67■■□□□ 1.7
SH3D21-201ENST00000453908 ZMYM1Q5SVZ6 1142 aa25.67■■□□□ 1.7
SH3D21-201ENST00000453908 SMARCC1Q92922 1105 aaPredicted RBP25.67■■□□□ 1.7
SH3D21-201ENST00000453908 UTP14AQ9BVJ6 771 aaKnown RBP25.67■■□□□ 1.7
SH3D21-201ENST00000453908 HMG20BQ9P0W2 317 aa25.67■■□□□ 1.7
SH3D21-201ENST00000453908 CYP21A2P08686 494 aa25.66■■□□□ 1.7
SH3D21-201ENST00000453908 LINC00116Q8NCU8 138 aa25.66■■□□□ 1.7
SH3D21-201ENST00000453908 RNF113AO15541 343 aaKnown RBP25.66■■□□□ 1.7
SH3D21-201ENST00000453908 NCLP19338 710 aaKnown RBP25.66■■□□□ 1.7
SH3D21-201ENST00000453908 RPS6KB1P23443 525 aa25.66■■□□□ 1.7
SH3D21-201ENST00000453908 SMC3Q9UQE7 1217 aa25.66■■□□□ 1.7
SH3D21-201ENST00000453908 MAST3O60307 1309 aa25.66■■□□□ 1.7
SH3D21-201ENST00000453908 GOLGA6L3A6NEY3 463 aa25.65■■□□□ 1.7
SH3D21-201ENST00000453908 ST3GAL1Q11201 340 aa25.65■■□□□ 1.7
SH3D21-201ENST00000453908 SEC31BQ9NQW1 1179 aa25.65■■□□□ 1.7
SH3D21-201ENST00000453908 HELLSQ9NRZ9 838 aa25.65■■□□□ 1.7
SH3D21-201ENST00000453908 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.65■■□□□ 1.7
SH3D21-201ENST00000453908 U3KPZ7 1027 aaPredicted RBP25.65■■□□□ 1.7
SH3D21-201ENST00000453908 VGLL2Q8N8G2 317 aa25.65■■□□□ 1.7
SH3D21-201ENST00000453908 USP21Q9UK80 565 aa25.65■■□□□ 1.7
SH3D21-201ENST00000453908 A0A0G2JLW4 131 aa25.64■■□□□ 1.7
SH3D21-201ENST00000453908 M0R2C6 588 aa25.64■■□□□ 1.7
SH3D21-201ENST00000453908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.64■■□□□ 1.7
SH3D21-201ENST00000453908 SNAP23O00161 211 aa25.64■■□□□ 1.69
SH3D21-201ENST00000453908 OSBP2Q969R2 916 aa25.64■■□□□ 1.69
SH3D21-201ENST00000453908 PDE8BO95263 885 aa25.63■■□□□ 1.69
SH3D21-201ENST00000453908 MCAMP43121 646 aa25.63■■□□□ 1.69
SH3D21-201ENST00000453908 WASHC4Q2M389 1173 aa25.63■■□□□ 1.69
SH3D21-201ENST00000453908 KLHL40Q2TBA0 621 aa25.63■■□□□ 1.69
SH3D21-201ENST00000453908 TSGA10IPQ3SY00 556 aa25.63■■□□□ 1.69
SH3D21-201ENST00000453908 TOB2Q14106 344 aaPredicted RBP25.62■■□□□ 1.69
SH3D21-201ENST00000453908 ZSCAN31Q96LW9 406 aaPredicted RBP25.62■■□□□ 1.69
SH3D21-201ENST00000453908 SH2B1Q9NRF2 756 aaPredicted RBP25.62■■□□□ 1.69
SH3D21-201ENST00000453908 FSD2A1L4K1 749 aa25.62■■□□□ 1.69
SH3D21-201ENST00000453908 HSPD1P10809 573 aaKnown RBP25.62■■□□□ 1.69
SH3D21-201ENST00000453908 GJB2P29033 226 aa25.62■■□□□ 1.69
SH3D21-201ENST00000453908 FNBP4Q8N3X1 1017 aaPredicted RBP25.62■■□□□ 1.69
SH3D21-201ENST00000453908 NEK1Q96PY6 1258 aa25.62■■□□□ 1.69
SH3D21-201ENST00000453908 WDR33Q9C0J8 1336 aaKnown RBP25.61■■□□□ 1.69
SH3D21-201ENST00000453908 NTSR2O95665 410 aa25.61■■□□□ 1.69
SH3D21-201ENST00000453908 SYT1P21579 422 aa25.61■■□□□ 1.69
SH3D21-201ENST00000453908 STK3Q13188 491 aa25.61■■□□□ 1.69
SH3D21-201ENST00000453908 STOX1Q6ZVD7 989 aa25.61■■□□□ 1.69
SH3D21-201ENST00000453908 LRRC2Q9BYS8 371 aa25.61■■□□□ 1.69
SH3D21-201ENST00000453908 PARP10Q53GL7 1025 aa25.6■■□□□ 1.69
SH3D21-201ENST00000453908 GDPD2Q9HCC8 539 aa25.6■■□□□ 1.69
SH3D21-201ENST00000453908 PHKA1P46020 1223 aa25.59■■□□□ 1.69
SH3D21-201ENST00000453908 KRT32Q14532 448 aa25.59■■□□□ 1.69
SH3D21-201ENST00000453908 RREB1Q92766 1687 aa25.59■■□□□ 1.69
SH3D21-201ENST00000453908 CAVIN1Q6NZI2 390 aaKnown RBP25.59■■□□□ 1.69
SH3D21-201ENST00000453908 MPHOSPH8Q99549 860 aa25.59■■□□□ 1.69
SH3D21-201ENST00000453908 STX6O43752 255 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms