RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 HTATSF1O43719 755 aaKnown RBP11.31□□□□□ -0.6
LINC00963-206ENST00000453213 NECTIN2Q92692 538 aa11.31□□□□□ -0.6
LINC00963-206ENST00000453213 ZC3H12CQ9C0D7 883 aaKnown RBP11.31□□□□□ -0.6
LINC00963-206ENST00000453213 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
LINC00963-206ENST00000453213 POLLQ9UGP5 575 aa11.31□□□□□ -0.6
LINC00963-206ENST00000453213 SCAF8Q9UPN6 1271 aaKnown RBP11.31□□□□□ -0.6
LINC00963-206ENST00000453213 GPSM2P81274 684 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 RSBN1LQ6PCB5 846 aaPredicted RBP11.3□□□□□ -0.6
LINC00963-206ENST00000453213 ARMC9Q7Z3E5 817 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 PNISRQ8TF01 805 aaKnown RBP11.3□□□□□ -0.6
LINC00963-206ENST00000453213 EFCC1Q9HA90 598 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 MYOZ2Q9NPC6 264 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 TRMT112Q9UI30 125 aaKnown RBP11.3□□□□□ -0.6
LINC00963-206ENST00000453213 HTTP42858 3142 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
LINC00963-206ENST00000453213 SH3TC1Q8TE82 1336 aa11.3□□□□□ -0.6
LINC00963-206ENST00000453213 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 MANSC4A6NHS7 340 aaPredicted RBP11.29□□□□□ -0.6
LINC00963-206ENST00000453213 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 INHBEP58166 350 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
LINC00963-206ENST00000453213 SLC4A8Q2Y0W8 1093 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 TBC1D16Q8TBP0 767 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 CD99L2Q8TCZ2 262 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
LINC00963-206ENST00000453213 ERBB4Q15303 1308 aa11.29□□□□□ -0.6
LINC00963-206ENST00000453213 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-206ENST00000453213 EIF4A1P60842 406 aaKnown RBP11.28□□□□□ -0.6
LINC00963-206ENST00000453213 PRKG1Q13976 671 aa11.28□□□□□ -0.6
LINC00963-206ENST00000453213 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
LINC00963-206ENST00000453213 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
LINC00963-206ENST00000453213 NLRP10Q86W26 655 aa11.28□□□□□ -0.6
LINC00963-206ENST00000453213 ZNF333Q96JL9 665 aa11.28□□□□□ -0.6
LINC00963-206ENST00000453213 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
LINC00963-206ENST00000453213 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
LINC00963-206ENST00000453213 SZT2Q5T011 3432 aa11.28□□□□□ -0.6
LINC00963-206ENST00000453213 ZNF609O15014 1411 aa11.27□□□□□ -0.6
LINC00963-206ENST00000453213 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
LINC00963-206ENST00000453213 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
LINC00963-206ENST00000453213 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
LINC00963-206ENST00000453213 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.61
LINC00963-206ENST00000453213 NUDCQ9Y266 331 aa11.27□□□□□ -0.61
LINC00963-206ENST00000453213 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
LINC00963-206ENST00000453213 UFL1O94874 794 aa11.26□□□□□ -0.61
LINC00963-206ENST00000453213 U2AF1L5P0DN76 240 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-206ENST00000453213 U2AF1Q01081 240 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00963-206ENST00000453213 SLC9C1Q4G0N8 1177 aa11.26□□□□□ -0.61
LINC00963-206ENST00000453213 OTUD7BQ6GQQ9 843 aa11.26□□□□□ -0.61
LINC00963-206ENST00000453213 DPF3Q92784 378 aa11.26□□□□□ -0.61
LINC00963-206ENST00000453213 SLC10A4Q96EP9 437 aa11.26□□□□□ -0.61
LINC00963-206ENST00000453213 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-206ENST00000453213 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
LINC00963-206ENST00000453213 IGF2BP3O00425 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00963-206ENST00000453213 SP3Q02447 781 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 NBPF9Q3BBW0 867 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 LDLRAD1Q5T700 205 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 GMLQ99445 158 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 ANGEL1Q9UNK9 670 aaKnown RBP11.25□□□□□ -0.61
LINC00963-206ENST00000453213 DDX60Q8IY21 1712 aaKnown RBP11.25□□□□□ -0.61
LINC00963-206ENST00000453213 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 TRIOBPQ9H2D6 2365 aa11.25□□□□□ -0.61
LINC00963-206ENST00000453213 USP17L3A6NCW0 530 aa11.24□□□□□ -0.61
LINC00963-206ENST00000453213 USP17L4A6NCW7 530 aa11.24□□□□□ -0.61
LINC00963-206ENST00000453213 MYCP01106 439 aaPredicted RBP11.24□□□□□ -0.61
LINC00963-206ENST00000453213 ZBTB48P10074 688 aaPredicted RBP11.24□□□□□ -0.61
LINC00963-206ENST00000453213 CRHR2Q13324 411 aa11.24□□□□□ -0.61
LINC00963-206ENST00000453213 USP17L1Q7RTZ2 530 aa11.24□□□□□ -0.61
LINC00963-206ENST00000453213 OGFOD1Q8N543 542 aa11.24□□□□□ -0.61
LINC00963-206ENST00000453213 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
LINC00963-206ENST00000453213 LAMB2P55268 1798 aa11.23□□□□□ -0.61
LINC00963-206ENST00000453213 CENPFP49454 3210 aa11.23□□□□□ -0.61
LINC00963-206ENST00000453213 PER1O15534 1290 aaPredicted RBP11.23□□□□□ -0.61
LINC00963-206ENST00000453213 EIF2S2P20042 333 aaKnown RBP11.23□□□□□ -0.61
LINC00963-206ENST00000453213 RPS8P62241 208 aaKnown RBP11.23□□□□□ -0.61
LINC00963-206ENST00000453213 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
LINC00963-206ENST00000453213 PDIA6Q15084 440 aa11.23□□□□□ -0.61
LINC00963-206ENST00000453213 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
LINC00963-206ENST00000453213 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
LINC00963-206ENST00000453213 ZNF428Q96B54 188 aa11.23□□□□□ -0.61
LINC00963-206ENST00000453213 PODXL2Q9NZ53 605 aa11.23□□□□□ -0.61
LINC00963-206ENST00000453213 PTCH2Q9Y6C5 1203 aa11.23□□□□□ -0.61
LINC00963-206ENST00000453213 WNT10BO00744 389 aa11.22□□□□□ -0.61
LINC00963-206ENST00000453213 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
LINC00963-206ENST00000453213 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
LINC00963-206ENST00000453213 APOBEC3FQ8IUX4 373 aaKnown RBP11.22□□□□□ -0.61
LINC00963-206ENST00000453213 WNK4Q96J92 1243 aa11.22□□□□□ -0.61
LINC00963-206ENST00000453213 BRCA2P51587 3418 aa11.21□□□□□ -0.61
LINC00963-206ENST00000453213 ANXA1P04083 346 aa11.21□□□□□ -0.61
LINC00963-206ENST00000453213 NEFMP07197 916 aa11.21□□□□□ -0.61
LINC00963-206ENST00000453213 XAGE3Q8WTP9 111 aa11.21□□□□□ -0.61
LINC00963-206ENST00000453213 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
LINC00963-206ENST00000453213 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
LINC00963-206ENST00000453213 SCN9AQ15858 1988 aa11.2□□□□□ -0.62
LINC00963-206ENST00000453213 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
LINC00963-206ENST00000453213 PPP1R12BO60237 982 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms