RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
COL27A1-202ENST00000451716 TOGARAM1Q9Y4F4 1720 aa14.39□□□□□ -0.11
COL27A1-202ENST00000451716 HLFQ16534 295 aa14.39□□□□□ -0.11
COL27A1-202ENST00000451716 NUP188Q5SRE5 1749 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 VPS37CA5D8V6 355 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-202ENST00000451716 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 KBTBD3Q8NAB2 608 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-202ENST00000451716 SLC4A9Q96Q91 983 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 PAG1Q9NWQ8 432 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 KCNG1Q9UIX4 513 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 F13A1P00488 732 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 TPM2P07951 284 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 TOB2Q14106 344 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-202ENST00000451716 CCDC57Q2TAC2 916 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 MCMDC2Q4G0Z9 681 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 LRRC2Q9BYS8 371 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-202ENST00000451716 TJP1Q07157 1748 aa14.38□□□□□ -0.11
COL27A1-202ENST00000451716 FIBPO43427 364 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 MBD3O95983 291 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 KIF6Q6ZMV9 814 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 A0A0G2JLW4 131 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 STARD3NLO95772 234 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 CYP21A2P08686 494 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 ADORA1P30542 326 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
COL27A1-202ENST00000451716 IFIT1P09914 478 aaKnown RBP14.36□□□□□ -0.11
COL27A1-202ENST00000451716 FKBP4Q02790 459 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL27A1-202ENST00000451716 PPP4R3BQ5MIZ7 849 aa14.36□□□□□ -0.11
COL27A1-202ENST00000451716 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
COL27A1-202ENST00000451716 RNF214Q8ND24 703 aa14.36□□□□□ -0.11
COL27A1-202ENST00000451716 PAPPAQ13219 1627 aa14.36□□□□□ -0.11
COL27A1-202ENST00000451716 DNM1Q05193 864 aaKnown RBP14.36□□□□□ -0.11
COL27A1-202ENST00000451716 USPL1Q5W0Q7 1092 aa14.36□□□□□ -0.11
COL27A1-202ENST00000451716 CEP126Q9P2H0 1117 aa14.36□□□□□ -0.11
COL27A1-202ENST00000451716 JCADQ9P266 1359 aa14.36□□□□□ -0.11
COL27A1-202ENST00000451716 TRIM44Q96DX7 344 aaPredicted RBP14.36□□□□□ -0.11
COL27A1-202ENST00000451716 FAM173BQ6P4H8 233 aa14.35□□□□□ -0.11
COL27A1-202ENST00000451716 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
COL27A1-202ENST00000451716 PRDM10Q9NQV6 1147 aa14.35□□□□□ -0.11
COL27A1-202ENST00000451716 HMG20BQ9P0W2 317 aa14.35□□□□□ -0.11
COL27A1-202ENST00000451716 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
COL27A1-202ENST00000451716 LARP1BQ659C4 914 aaKnown RBP14.35□□□□□ -0.11
COL27A1-202ENST00000451716 NEK1Q96PY6 1258 aa14.35□□□□□ -0.11
COL27A1-202ENST00000451716 GORABQ5T7V8 394 aa14.34□□□□□ -0.11
COL27A1-202ENST00000451716 STOX1Q6ZVD7 989 aa14.34□□□□□ -0.11
COL27A1-202ENST00000451716 ANP32BQ92688 251 aaKnown RBP14.34□□□□□ -0.11
COL27A1-202ENST00000451716 TBC1D2BQ9UPU7 963 aa14.34□□□□□ -0.11
COL27A1-202ENST00000451716 ADAMTS2O95450 1211 aa14.34□□□□□ -0.11
COL27A1-202ENST00000451716 PI16Q6UXB8 463 aa14.34□□□□□ -0.11
COL27A1-202ENST00000451716 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
COL27A1-202ENST00000451716 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
COL27A1-202ENST00000451716 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
COL27A1-202ENST00000451716 MAP3K15Q6ZN16 1313 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 EXOC5O00471 708 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 PCCAP05165 728 aaPredicted RBP14.33□□□□□ -0.11
COL27A1-202ENST00000451716 CYP19A1P11511 503 aaPredicted RBP14.33□□□□□ -0.11
COL27A1-202ENST00000451716 SCARF1Q14162 830 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 TSGA10IPQ3SY00 556 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 HSP90AB3PQ58FF7 597 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 Q6ZUG5 572 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 ZBTB38Q8NAP3 1195 aaPredicted RBP14.33□□□□□ -0.11
COL27A1-202ENST00000451716 RGS22Q8NE09 1264 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 XAGE2Q96GT9 111 aa14.33□□□□□ -0.11
COL27A1-202ENST00000451716 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.11
COL27A1-202ENST00000451716 NHSL1Q5SYE7 1610 aa14.33□□□□□ -0.12
COL27A1-202ENST00000451716 CIAO1O76071 339 aa14.33□□□□□ -0.12
COL27A1-202ENST00000451716 IFIT5Q13325 482 aaKnown RBP14.33□□□□□ -0.12
COL27A1-202ENST00000451716 GIGYF2Q6Y7W6 1299 aaKnown RBP14.33□□□□□ -0.12
COL27A1-202ENST00000451716 GREM2Q9H772 168 aa14.33□□□□□ -0.12
COL27A1-202ENST00000451716 JAK2O60674 1132 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 NLRP10Q86W26 655 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 SH3TC1Q8TE82 1336 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 HSP90B1P14625 803 aaKnown RBP14.32□□□□□ -0.12
COL27A1-202ENST00000451716 CCDC173Q0VFZ6 552 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 TRIM28Q13263 835 aaKnown RBP14.32□□□□□ -0.12
COL27A1-202ENST00000451716 TTC39AQ5SRH9 613 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 ZMYM1Q5SVZ6 1142 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 TTLL5Q6EMB2 1281 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 CHST3Q7LGC8 479 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 BRF1Q92994 677 aa14.32□□□□□ -0.12
COL27A1-202ENST00000451716 MAST3O60307 1309 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 BCL9O00512 1426 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 FAM177BA6PVY3 158 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 ESPNB1AK53 854 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 M0R2C6 588 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
COL27A1-202ENST00000451716 ITGA6P23229 1130 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 KRT32Q14532 448 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 PALLDQ8WX93 1383 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 RNF113AO15541 343 aaKnown RBP14.31□□□□□ -0.12
COL27A1-202ENST00000451716 CCDC158Q5M9N0 1113 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 TMEM87AQ8NBN3 555 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 OSBP2Q969R2 916 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
COL27A1-202ENST00000451716 PPP1R9BQ96SB3 815 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms