RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 MPHOSPH8Q99549 860 aa13.71□□□□□ -0.21
NDUFA3-209ENST00000451517 COL4A1P02462 1669 aa13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 TNRC6CQ9HCJ0 1690 aaKnown RBP13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 PDE8BO95263 885 aa13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 MAP4K4O95819 1239 aaPredicted RBP13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 CHMLP26374 656 aa13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 SLC15A2Q16348 729 aa13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 NEUROD6Q96NK8 337 aa13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
NDUFA3-209ENST00000451517 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 ATP2B3Q16720 1220 aa13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 ANKRD18AQ8IVF6 992 aa13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 EVI5LQ96CN4 794 aa13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 QSER1Q2KHR3 1735 aa13.69□□□□□ -0.22
NDUFA3-209ENST00000451517 NPHP1O15259 732 aa13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 MSH5O43196 834 aa13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 FGFR2P21802 821 aa13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 ADORA1P30542 326 aa13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 ST5P78524 1137 aa13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 XAGE2Q96GT9 111 aa13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 HAUS7Q99871 368 aa13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 BSDC1Q9NW68 430 aaPredicted RBP13.68□□□□□ -0.22
NDUFA3-209ENST00000451517 CCDC125Q86Z20 511 aa13.67□□□□□ -0.22
NDUFA3-209ENST00000451517 LPIN2Q92539 896 aa13.67□□□□□ -0.22
NDUFA3-209ENST00000451517 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
NDUFA3-209ENST00000451517 ESYT1Q9BSJ8 1104 aa13.67□□□□□ -0.22
NDUFA3-209ENST00000451517 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
NDUFA3-209ENST00000451517 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
NDUFA3-209ENST00000451517 KLRG2A4D1S0 409 aaPredicted RBP13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 CHRNDQ07001 517 aa13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 CRY2Q49AN0 593 aa13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 CCDC158Q5M9N0 1113 aa13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 DDX46Q7L014 1031 aaKnown RBP13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 DEFB132Q7Z7B7 95 aa13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 RFX7Q2KHR2 1363 aa13.66□□□□□ -0.22
NDUFA3-209ENST00000451517 SPEF2Q9C093 1822 aa13.65□□□□□ -0.22
NDUFA3-209ENST00000451517 SLC5A1P13866 664 aa13.65□□□□□ -0.22
NDUFA3-209ENST00000451517 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
NDUFA3-209ENST00000451517 HIP1O00291 1037 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 TAF5LO75529 589 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 REC8O95072 547 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 MMP10P09238 476 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 IFIT1P09914 478 aaKnown RBP13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 GRAPQ13588 217 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 TTC39AQ5SRH9 613 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 TICAM2Q86XR7 235 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 GRAPLQ8TC17 118 aaPredicted RBP13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
NDUFA3-209ENST00000451517 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 AK9Q5TCS8 1911 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 SGSM2O43147 1006 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 HOXA10P31260 410 aaPredicted RBP13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 EDC3Q96F86 508 aaKnown RBP13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 DIAPH3Q9NSV4 1193 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 PAG1Q9NWQ8 432 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 PARP3Q9Y6F1 533 aa13.63□□□□□ -0.23
NDUFA3-209ENST00000451517 EPB41L2O43491 1005 aaKnown RBP13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 UQCRFS1P1P0C7P4 283 aa13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 ARID4AP29374 1257 aaPredicted RBP13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 UBE4AQ14139 1066 aa13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 MSL1Q68DK7 614 aa13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 KBTBD3Q8NAB2 608 aa13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 RUFY2Q8WXA3 655 aa13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 RBM17Q96I25 401 aaKnown RBP13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
NDUFA3-209ENST00000451517 TAF1P21675 1872 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 SNAP23O00161 211 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 GOLIM4O00461 696 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 PHKA1P46020 1223 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 SCARF1Q14162 830 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 CCDC102BQ68D86 513 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 CRAMP1Q96RY5 1269 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 IL25Q9H293 177 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 SNRKQ9NRH2 765 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 NDUFB9Q9Y6M9 179 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 RAD50Q92878 1312 aa13.61□□□□□ -0.23
NDUFA3-209ENST00000451517 MCAMP43121 646 aa13.6□□□□□ -0.23
NDUFA3-209ENST00000451517 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
NDUFA3-209ENST00000451517 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
NDUFA3-209ENST00000451517 ANKRD31Q8N7Z5 1873 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms