RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 NECTIN2Q92692 538 aa13.21□□□□□ -0.29
LINC02561-201ENST00000449457 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.29
LINC02561-201ENST00000449457 ATMINO43313 823 aaPredicted RBP13.2□□□□□ -0.3
LINC02561-201ENST00000449457 MAP2K2P36507 400 aa13.2□□□□□ -0.3
LINC02561-201ENST00000449457 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
LINC02561-201ENST00000449457 SCAF8Q9UPN6 1271 aaKnown RBP13.2□□□□□ -0.3
LINC02561-201ENST00000449457 MKI67P46013 3256 aaKnown RBP13.2□□□□□ -0.3
LINC02561-201ENST00000449457 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
LINC02561-201ENST00000449457 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
LINC02561-201ENST00000449457 ZNF34Q8IZ26 560 aa13.19□□□□□ -0.3
LINC02561-201ENST00000449457 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
LINC02561-201ENST00000449457 DBNDD1Q9H9R9 158 aa13.19□□□□□ -0.3
LINC02561-201ENST00000449457 KCNQ5Q9NR82 932 aa13.19□□□□□ -0.3
LINC02561-201ENST00000449457 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
LINC02561-201ENST00000449457 POLR2AP24928 1970 aaKnown RBP13.19□□□□□ -0.3
LINC02561-201ENST00000449457 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
LINC02561-201ENST00000449457 FAM155AB1AL88 458 aaPredicted RBP13.18□□□□□ -0.3
LINC02561-201ENST00000449457 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
LINC02561-201ENST00000449457 EIF4A1P60842 406 aaKnown RBP13.18□□□□□ -0.3
LINC02561-201ENST00000449457 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
LINC02561-201ENST00000449457 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
LINC02561-201ENST00000449457 DPP8Q6V1X1 898 aaPredicted RBP13.18□□□□□ -0.3
LINC02561-201ENST00000449457 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
LINC02561-201ENST00000449457 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
LINC02561-201ENST00000449457 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
LINC02561-201ENST00000449457 ERVV-1B6SEH8 477 aa13.17□□□□□ -0.3
LINC02561-201ENST00000449457 TRPA1O75762 1119 aa13.17□□□□□ -0.3
LINC02561-201ENST00000449457 EIF2S2P20042 333 aaKnown RBP13.17□□□□□ -0.3
LINC02561-201ENST00000449457 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
LINC02561-201ENST00000449457 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
LINC02561-201ENST00000449457 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
LINC02561-201ENST00000449457 DDX60Q8IY21 1712 aaKnown RBP13.16□□□□□ -0.3
LINC02561-201ENST00000449457 PSMD14O00487 310 aa13.16□□□□□ -0.3
LINC02561-201ENST00000449457 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
LINC02561-201ENST00000449457 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
LINC02561-201ENST00000449457 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
LINC02561-201ENST00000449457 SCN9AQ15858 1988 aa13.16□□□□□ -0.3
LINC02561-201ENST00000449457 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
LINC02561-201ENST00000449457 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
LINC02561-201ENST00000449457 KIAA2012Q0VF49 1180 aa13.15□□□□□ -0.3
LINC02561-201ENST00000449457 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
LINC02561-201ENST00000449457 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
LINC02561-201ENST00000449457 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
LINC02561-201ENST00000449457 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
LINC02561-201ENST00000449457 MPNDQ8N594 471 aa13.15□□□□□ -0.3
LINC02561-201ENST00000449457 KCNV2Q8TDN2 545 aa13.15□□□□□ -0.3
LINC02561-201ENST00000449457 NLRP3Q96P20 1036 aa13.15□□□□□ -0.3
LINC02561-201ENST00000449457 HTTP42858 3142 aa13.15□□□□□ -0.31
LINC02561-201ENST00000449457 CENPFP49454 3210 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 CA12O43570 354 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 NOGQ13253 232 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
LINC02561-201ENST00000449457 MOB2Q70IA6 237 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 KRT26Q7Z3Y9 468 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 UTP14AQ9BVJ6 771 aaKnown RBP13.14□□□□□ -0.31
LINC02561-201ENST00000449457 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
LINC02561-201ENST00000449457 GBA2Q9HCG7 927 aaPredicted RBP13.14□□□□□ -0.31
LINC02561-201ENST00000449457 RNF186Q9NXI6 227 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 PGAP2Q9UHJ9 254 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 BRCA2P51587 3418 aa13.14□□□□□ -0.31
LINC02561-201ENST00000449457 ZNF157P51786 506 aaPredicted RBP13.13□□□□□ -0.31
LINC02561-201ENST00000449457 PDIA6Q15084 440 aa13.13□□□□□ -0.31
LINC02561-201ENST00000449457 RGMBQ6NW40 437 aa13.13□□□□□ -0.31
LINC02561-201ENST00000449457 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
LINC02561-201ENST00000449457 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
LINC02561-201ENST00000449457 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
LINC02561-201ENST00000449457 AKAP11Q9UKA4 1901 aa13.13□□□□□ -0.31
LINC02561-201ENST00000449457 CELF1Q92879 486 aaKnown RBP13.12□□□□□ -0.31
LINC02561-201ENST00000449457 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
LINC02561-201ENST00000449457 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
LINC02561-201ENST00000449457 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
LINC02561-201ENST00000449457 H7C1D1 291 aa13.11□□□□□ -0.31
LINC02561-201ENST00000449457 GRAPQ13588 217 aa13.11□□□□□ -0.31
LINC02561-201ENST00000449457 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
LINC02561-201ENST00000449457 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
LINC02561-201ENST00000449457 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
LINC02561-201ENST00000449457 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
LINC02561-201ENST00000449457 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
LINC02561-201ENST00000449457 TMX4Q9H1E5 349 aaPredicted RBP13.11□□□□□ -0.31
LINC02561-201ENST00000449457 ECE2O60344 883 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 SLC10A3P09131 477 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
LINC02561-201ENST00000449457 GPSM2P81274 684 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 TNIP1Q15025 636 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 KIF4BQ2VIQ3 1234 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
LINC02561-201ENST00000449457 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 CSRNP1Q96S65 589 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 POLLQ9UGP5 575 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
LINC02561-201ENST00000449457 TSPYL4Q9UJ04 414 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
LINC02561-201ENST00000449457 C6orf229H3BNL8 230 aa13.09□□□□□ -0.31
LINC02561-201ENST00000449457 PDE4AP27815 886 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms