RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CEP126Q9P2H0 1117 aa23.71■■□□□ 1.39
RPS28-202ENST00000449223 ARAP2Q8WZ64 1704 aa23.71■■□□□ 1.39
RPS28-202ENST00000449223 SRGNP10124 158 aa23.7■■□□□ 1.38
RPS28-202ENST00000449223 TNNI3KQ59H18 835 aa23.7■■□□□ 1.38
RPS28-202ENST00000449223 OTUD7AQ8TE49 926 aaPredicted RBP23.7■■□□□ 1.38
RPS28-202ENST00000449223 FPGT-TNNI3KV9GXZ4 949 aa23.7■■□□□ 1.38
RPS28-202ENST00000449223 AOX1Q06278 1338 aa23.7■■□□□ 1.38
RPS28-202ENST00000449223 DLEC1Q9Y238 1755 aa23.7■■□□□ 1.38
RPS28-202ENST00000449223 MX1P20591 662 aa23.69■■□□□ 1.38
RPS28-202ENST00000449223 RBM17Q96I25 401 aaKnown RBP23.69■■□□□ 1.38
RPS28-202ENST00000449223 LRRC37AA6NMS7 1700 aa23.69■■□□□ 1.38
RPS28-202ENST00000449223 PDE1AP54750 535 aa23.69■■□□□ 1.38
RPS28-202ENST00000449223 SGIP1Q9BQI5 828 aa23.69■■□□□ 1.38
RPS28-202ENST00000449223 AKAP2Q9Y2D5 859 aa23.69■■□□□ 1.38
RPS28-202ENST00000449223 PDE8BO95263 885 aa23.68■■□□□ 1.38
RPS28-202ENST00000449223 ZBTB7AO95365 584 aa23.68■■□□□ 1.38
RPS28-202ENST00000449223 NPR1P16066 1061 aa23.68■■□□□ 1.38
RPS28-202ENST00000449223 METTL24Q5JXM2 366 aa23.68■■□□□ 1.38
RPS28-202ENST00000449223 AACSQ86V21 672 aa23.68■■□□□ 1.38
RPS28-202ENST00000449223 PELP1Q8IZL8 1130 aaKnown RBP23.68■■□□□ 1.38
RPS28-202ENST00000449223 TTC41PQ6P2S7 1318 aa23.68■■□□□ 1.38
RPS28-202ENST00000449223 IFIT2P09913 472 aaKnown RBP23.66■■□□□ 1.38
RPS28-202ENST00000449223 TMC4Q7Z404 712 aa23.66■■□□□ 1.38
RPS28-202ENST00000449223 MASTLQ96GX5 879 aa23.66■■□□□ 1.38
RPS28-202ENST00000449223 BBOX1O75936 387 aa23.65■■□□□ 1.38
RPS28-202ENST00000449223 POLD1P28340 1107 aa23.65■■□□□ 1.38
RPS28-202ENST00000449223 MINPP1Q9UNW1 487 aa23.65■■□□□ 1.38
RPS28-202ENST00000449223 FGFR2P21802 821 aa23.64■■□□□ 1.38
RPS28-202ENST00000449223 CHRNDQ07001 517 aa23.64■■□□□ 1.38
RPS28-202ENST00000449223 BMP2KLQ5H9B9 411 aa23.64■■□□□ 1.38
RPS28-202ENST00000449223 DBNLQ9UJU6 430 aaKnown RBP23.64■■□□□ 1.38
RPS28-202ENST00000449223 KIAA1551Q9HCM1 1747 aa23.64■■□□□ 1.38
RPS28-202ENST00000449223 A0A1B0GUL7 405 aa23.64■■□□□ 1.37
RPS28-202ENST00000449223 PSDA5PKW4 1024 aaPredicted RBP23.64■■□□□ 1.37
RPS28-202ENST00000449223 ALDH1B1P30837 517 aa23.64■■□□□ 1.37
RPS28-202ENST00000449223 PUM3Q15397 648 aaKnown RBP23.64■■□□□ 1.37
RPS28-202ENST00000449223 STYK1Q6J9G0 422 aa23.64■■□□□ 1.37
RPS28-202ENST00000449223 LTBP1Q14766 1721 aa23.63■■□□□ 1.37
RPS28-202ENST00000449223 TTC22Q5TAA0 569 aa23.63■■□□□ 1.37
RPS28-202ENST00000449223 PI4K2BQ8TCG2 481 aa23.63■■□□□ 1.37
RPS28-202ENST00000449223 GPATCH3Q96I76 525 aa23.63■■□□□ 1.37
RPS28-202ENST00000449223 ECHDC1Q9NTX5 307 aa23.63■■□□□ 1.37
RPS28-202ENST00000449223 H0YIN7 160 aa23.62■■□□□ 1.37
RPS28-202ENST00000449223 ATP2B3Q16720 1220 aa23.62■■□□□ 1.37
RPS28-202ENST00000449223 LPIN2Q92539 896 aa23.62■■□□□ 1.37
RPS28-202ENST00000449223 ANKRD2Q9GZV1 360 aa23.62■■□□□ 1.37
RPS28-202ENST00000449223 CCDC8Q9H0W5 538 aaPredicted RBP23.62■■□□□ 1.37
RPS28-202ENST00000449223 TLR7Q9NYK1 1049 aaKnown RBP23.62■■□□□ 1.37
RPS28-202ENST00000449223 ATF5Q9Y2D1 282 aaPredicted RBP23.62■■□□□ 1.37
RPS28-202ENST00000449223 PTGER2P43116 358 aa23.61■■□□□ 1.37
RPS28-202ENST00000449223 TIMM10P62072 90 aa23.6■■□□□ 1.37
RPS28-202ENST00000449223 UBE4AQ14139 1066 aa23.6■■□□□ 1.37
RPS28-202ENST00000449223 C2CD5Q86YS7 1000 aa23.6■■□□□ 1.37
RPS28-202ENST00000449223 DBNDD2Q9BQY9 259 aa23.6■■□□□ 1.37
RPS28-202ENST00000449223 ERC2O15083 957 aa23.59■■□□□ 1.37
RPS28-202ENST00000449223 GLRX3O76003 335 aaKnown RBP23.59■■□□□ 1.37
RPS28-202ENST00000449223 GSPT1P15170 499 aaKnown RBP23.59■■□□□ 1.37
RPS28-202ENST00000449223 BCL11AQ9H165 835 aa23.59■■□□□ 1.37
RPS28-202ENST00000449223 CACNA1SQ13698 1873 aa23.58■■□□□ 1.37
RPS28-202ENST00000449223 TAF5LO75529 589 aa23.58■■□□□ 1.36
RPS28-202ENST00000449223 ATP5JP18859 108 aa23.58■■□□□ 1.36
RPS28-202ENST00000449223 SP8Q8IXZ3 490 aa23.58■■□□□ 1.36
RPS28-202ENST00000449223 HELBQ8NG08 1087 aaPredicted RBP23.58■■□□□ 1.36
RPS28-202ENST00000449223 XAGE2Q96GT9 111 aa23.58■■□□□ 1.36
RPS28-202ENST00000449223 NEUROD6Q96NK8 337 aa23.58■■□□□ 1.36
RPS28-202ENST00000449223 PPEF1O14829 653 aaPredicted RBP23.57■■□□□ 1.36
RPS28-202ENST00000449223 TGFB2P61812 414 aa23.57■■□□□ 1.36
RPS28-202ENST00000449223 TSHZ3Q63HK5 1081 aa23.57■■□□□ 1.36
RPS28-202ENST00000449223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.57■■□□□ 1.36
RPS28-202ENST00000449223 CNKSR1Q969H4 720 aa23.57■■□□□ 1.36
RPS28-202ENST00000449223 ZNF512BQ96KM6 892 aaPredicted RBP23.57■■□□□ 1.36
RPS28-202ENST00000449223 PODXL2Q9NZ53 605 aa23.57■■□□□ 1.36
RPS28-202ENST00000449223 ATP6V0A2Q9Y487 856 aa23.57■■□□□ 1.36
RPS28-202ENST00000449223 BRCA1P38398 1863 aaKnown RBP23.57■■□□□ 1.36
RPS28-202ENST00000449223 XDHP47989 1333 aa23.56■■□□□ 1.36
RPS28-202ENST00000449223 SLC5A1P13866 664 aa23.56■■□□□ 1.36
RPS28-202ENST00000449223 SLX4Q8IY92 1834 aa23.56■■□□□ 1.36
RPS28-202ENST00000449223 IFIT1P09914 478 aaKnown RBP23.55■■□□□ 1.36
RPS28-202ENST00000449223 LEMD3Q9Y2U8 911 aa23.55■■□□□ 1.36
RPS28-202ENST00000449223 CD2APQ9Y5K6 639 aa23.55■■□□□ 1.36
RPS28-202ENST00000449223 ZBTB22O15209 634 aa23.54■■□□□ 1.36
RPS28-202ENST00000449223 CHRNA5P30532 468 aa23.54■■□□□ 1.36
RPS28-202ENST00000449223 AK9Q5TCS8 1911 aa23.54■■□□□ 1.36
RPS28-202ENST00000449223 ADORA1P30542 326 aa23.54■■□□□ 1.36
RPS28-202ENST00000449223 IRS2Q9Y4H2 1338 aa23.53■■□□□ 1.36
RPS28-202ENST00000449223 AKAP11Q9UKA4 1901 aa23.53■■□□□ 1.36
RPS28-202ENST00000449223 KCNA3P22001 575 aa23.53■■□□□ 1.36
RPS28-202ENST00000449223 CCDC158Q5M9N0 1113 aa23.53■■□□□ 1.36
RPS28-202ENST00000449223 PRPF40BQ6NWY9 871 aaKnown RBP23.53■■□□□ 1.36
RPS28-202ENST00000449223 C15orf52Q6ZUT6 534 aaKnown RBP23.53■■□□□ 1.36
RPS28-202ENST00000449223 ZNF622Q969S3 477 aaKnown RBP eCLIP23.53■■□□□ 1.36
RPS28-202ENST00000449223 SPON1Q9HCB6 807 aa23.53■■□□□ 1.36
RPS28-202ENST00000449223 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
RPS28-202ENST00000449223 SNED1Q8TER0 1413 aa23.52■■□□□ 1.36
RPS28-202ENST00000449223 SDSP20132 328 aa23.52■■□□□ 1.36
RPS28-202ENST00000449223 C7orf43Q8WVR3 580 aa23.52■■□□□ 1.36
RPS28-202ENST00000449223 ZNF804BA4D1E1 1349 aa23.52■■□□□ 1.36
RPS28-202ENST00000449223 SNAP23O00161 211 aa23.51■■□□□ 1.35
RPS28-202ENST00000449223 ARID4AP29374 1257 aaPredicted RBP23.51■■□□□ 1.35
RPS28-202ENST00000449223 HAUS7Q99871 368 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms