RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
GTF3C3-206ENST00000448539 ANKRD44Q8N8A2 993 aa17.55■□□□□ 0.4
GTF3C3-206ENST00000448539 EYA3Q99504 573 aa17.55■□□□□ 0.4
GTF3C3-206ENST00000448539 NMRK2Q9NPI5 230 aa17.55■□□□□ 0.4
GTF3C3-206ENST00000448539 MINPP1Q9UNW1 487 aa17.55■□□□□ 0.4
GTF3C3-206ENST00000448539 LRRFIP2Q9Y608 721 aaKnown RBP17.55■□□□□ 0.4
GTF3C3-206ENST00000448539 XDHP47989 1333 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 PLIN1O60240 522 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 UFL1O94874 794 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 HSPA6P17066 643 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 AOC3Q16853 763 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 LDHAL6AQ6ZMR3 332 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 NIM1KQ8IY84 436 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 ANKRD2Q9GZV1 360 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 CNNM1Q9NRU3 951 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 COL4A1P02462 1669 aa17.54■□□□□ 0.4
GTF3C3-206ENST00000448539 GNAI2P04899 355 aa17.53■□□□□ 0.4
GTF3C3-206ENST00000448539 RLBP1P12271 317 aa17.53■□□□□ 0.4
GTF3C3-206ENST00000448539 ATP2B4P23634 1241 aa17.53■□□□□ 0.4
GTF3C3-206ENST00000448539 WASHC4Q2M389 1173 aa17.53■□□□□ 0.4
GTF3C3-206ENST00000448539 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
GTF3C3-206ENST00000448539 ZNF594Q96JF6 807 aaPredicted RBP17.53■□□□□ 0.4
GTF3C3-206ENST00000448539 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
GTF3C3-206ENST00000448539 KDM2BQ8NHM5 1336 aa17.52■□□□□ 0.4
GTF3C3-206ENST00000448539 G3V3G9 751 aa17.52■□□□□ 0.4
GTF3C3-206ENST00000448539 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.4
GTF3C3-206ENST00000448539 ZC3H12CQ9C0D7 883 aaKnown RBP17.52■□□□□ 0.4
GTF3C3-206ENST00000448539 LRRC37AA6NMS7 1700 aa17.52■□□□□ 0.39
GTF3C3-206ENST00000448539 RIMBP2O15034 1052 aa17.51■□□□□ 0.39
GTF3C3-206ENST00000448539 TOMM70O94826 608 aa17.51■□□□□ 0.39
GTF3C3-206ENST00000448539 KCNJ4P48050 445 aa17.51■□□□□ 0.39
GTF3C3-206ENST00000448539 EIF6P56537 245 aaKnown RBP17.51■□□□□ 0.39
GTF3C3-206ENST00000448539 CHRNDQ07001 517 aa17.51■□□□□ 0.39
GTF3C3-206ENST00000448539 KIAA2012Q0VF49 1180 aa17.51■□□□□ 0.39
GTF3C3-206ENST00000448539 GLTPD2A6NH11 291 aa17.5■□□□□ 0.39
GTF3C3-206ENST00000448539 LEMD3Q9Y2U8 911 aa17.5■□□□□ 0.39
GTF3C3-206ENST00000448539 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
GTF3C3-206ENST00000448539 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
GTF3C3-206ENST00000448539 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
GTF3C3-206ENST00000448539 FZD9O00144 591 aa17.48■□□□□ 0.39
GTF3C3-206ENST00000448539 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
GTF3C3-206ENST00000448539 MVPQ14764 893 aaKnown RBP17.48■□□□□ 0.39
GTF3C3-206ENST00000448539 GPR101Q96P66 508 aaPredicted RBP17.48■□□□□ 0.39
GTF3C3-206ENST00000448539 ZNRF3Q9ULT6 936 aa17.48■□□□□ 0.39
GTF3C3-206ENST00000448539 DDX19BQ9UMR2 479 aa17.48■□□□□ 0.39
GTF3C3-206ENST00000448539 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
GTF3C3-206ENST00000448539 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 SRGAP3O43295 1099 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 HELBQ8NG08 1087 aaPredicted RBP17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 KLHDC4Q8TBB5 520 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 DICER1Q9UPY3 1922 aaKnown RBP17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
GTF3C3-206ENST00000448539 TAF5LO75529 589 aa17.46■□□□□ 0.39
GTF3C3-206ENST00000448539 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
GTF3C3-206ENST00000448539 RFX5P48382 616 aaPredicted RBP17.46■□□□□ 0.39
GTF3C3-206ENST00000448539 METTL24Q5JXM2 366 aa17.46■□□□□ 0.39
GTF3C3-206ENST00000448539 DBNDD1Q9H9R9 158 aa17.46■□□□□ 0.39
GTF3C3-206ENST00000448539 EYA2O00167 538 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 PTPN12Q05209 780 aaKnown RBP17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 MTX1Q13505 466 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 DOK7Q18PE1 504 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 LRRC24Q50LG9 513 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 C16orf71Q8IYS4 520 aaPredicted RBP17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 RBM46Q8TBY0 533 aaKnown RBP17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 SIL1Q9H173 461 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 C1orf115Q9H7X2 142 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 RIPOR2Q9Y4F9 1068 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
GTF3C3-206ENST00000448539 MED23Q9ULK4 1368 aa17.44■□□□□ 0.38
GTF3C3-206ENST00000448539 ECE2O60344 883 aa17.44■□□□□ 0.38
GTF3C3-206ENST00000448539 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
GTF3C3-206ENST00000448539 TNIP1Q15025 636 aa17.44■□□□□ 0.38
GTF3C3-206ENST00000448539 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
GTF3C3-206ENST00000448539 GPC2Q8N158 579 aa17.44■□□□□ 0.38
GTF3C3-206ENST00000448539 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
GTF3C3-206ENST00000448539 COL4A5P29400 1685 aa17.43■□□□□ 0.38
GTF3C3-206ENST00000448539 APLP1P51693 650 aa17.43■□□□□ 0.38
GTF3C3-206ENST00000448539 CIAPIN1Q6FI81 312 aa17.43■□□□□ 0.38
GTF3C3-206ENST00000448539 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
GTF3C3-206ENST00000448539 WTIPA6NIX2 430 aaPredicted RBP17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 RAD17O75943 681 aa17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 CIAO1O76071 339 aa17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 VEGFAP15692 232 aaPredicted RBP17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 CXCL9Q07325 125 aa17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 COPRSQ9NQ92 184 aa17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
GTF3C3-206ENST00000448539 PNMA6EA0A0J9YXQ4 647 aa17.41■□□□□ 0.38
GTF3C3-206ENST00000448539 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
GTF3C3-206ENST00000448539 YDJCA8MPS7 323 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms