RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 CDC5LQ99459 802 aaKnown RBP22.57■■□□□ 1.2
DDX56-207ENST00000448192 GREM2Q9H772 168 aa22.57■■□□□ 1.2
DDX56-207ENST00000448192 ADARB2Q9NS39 739 aaKnown RBP22.57■■□□□ 1.2
DDX56-207ENST00000448192 PODXL2Q9NZ53 605 aa22.57■■□□□ 1.2
DDX56-207ENST00000448192 F6X3S4 739 aa22.56■■□□□ 1.2
DDX56-207ENST00000448192 ZC3H12CQ9C0D7 883 aaKnown RBP22.56■■□□□ 1.2
DDX56-207ENST00000448192 GGA1Q9UJY5 639 aa22.56■■□□□ 1.2
DDX56-207ENST00000448192 ZNF521Q96K83 1311 aa22.56■■□□□ 1.2
DDX56-207ENST00000448192 G3V3G9 751 aa22.55■■□□□ 1.2
DDX56-207ENST00000448192 ECE2O60344 883 aa22.55■■□□□ 1.2
DDX56-207ENST00000448192 DCAF8Q5TAQ9 597 aa22.55■■□□□ 1.2
DDX56-207ENST00000448192 MKRN1Q9UHC7 482 aaKnown RBP22.55■■□□□ 1.2
DDX56-207ENST00000448192 TMEM88BA6NKF7 163 aa22.54■■□□□ 1.2
DDX56-207ENST00000448192 XDHP47989 1333 aa22.54■■□□□ 1.2
DDX56-207ENST00000448192 PSMD14O00487 310 aa22.53■■□□□ 1.2
DDX56-207ENST00000448192 KCNQ5Q9NR82 932 aa22.53■■□□□ 1.2
DDX56-207ENST00000448192 CNOT7Q9UIV1 285 aaKnown RBP22.53■■□□□ 1.2
DDX56-207ENST00000448192 ZBTB12Q9Y330 459 aaPredicted RBP22.53■■□□□ 1.2
DDX56-207ENST00000448192 RTL9Q8NET4 1388 aa22.52■■□□□ 1.2
DDX56-207ENST00000448192 CASP7P55210 303 aa22.52■■□□□ 1.2
DDX56-207ENST00000448192 PLA2G12BQ9BX93 195 aa22.52■■□□□ 1.2
DDX56-207ENST00000448192 SCN9AQ15858 1988 aa22.51■■□□□ 1.19
DDX56-207ENST00000448192 BSDC1Q9NW68 430 aaPredicted RBP22.51■■□□□ 1.19
DDX56-207ENST00000448192 TRPM7Q96QT4 1865 aa22.5■■□□□ 1.19
DDX56-207ENST00000448192 SHTN1A0MZ66 631 aa22.5■■□□□ 1.19
DDX56-207ENST00000448192 H7C1D1 291 aa22.5■■□□□ 1.19
DDX56-207ENST00000448192 ATP2B4P23634 1241 aa22.5■■□□□ 1.19
DDX56-207ENST00000448192 BEND3Q5T5X7 828 aa22.5■■□□□ 1.19
DDX56-207ENST00000448192 MICALL2Q8IY33 904 aa22.5■■□□□ 1.19
DDX56-207ENST00000448192 MINPP1Q9UNW1 487 aa22.5■■□□□ 1.19
DDX56-207ENST00000448192 E9PSI1 815 aa22.49■■□□□ 1.19
DDX56-207ENST00000448192 ITGA6P23229 1130 aa22.49■■□□□ 1.19
DDX56-207ENST00000448192 IGHMBP2P38935 993 aaKnown RBP22.49■■□□□ 1.19
DDX56-207ENST00000448192 FMR1Q06787 632 aaKnown RBP eCLIP22.49■■□□□ 1.19
DDX56-207ENST00000448192 FAM161AQ3B820 660 aa22.49■■□□□ 1.19
DDX56-207ENST00000448192 SLC4A10Q6U841 1118 aa22.49■■□□□ 1.19
DDX56-207ENST00000448192 TRAF5O00463 557 aa22.48■■□□□ 1.19
DDX56-207ENST00000448192 CSF1RP07333 972 aa22.48■■□□□ 1.19
DDX56-207ENST00000448192 TRPM4Q8TD43 1214 aa22.48■■□□□ 1.19
DDX56-207ENST00000448192 DPF2Q92785 391 aa22.48■■□□□ 1.19
DDX56-207ENST00000448192 CNTNAP1P78357 1384 aa22.48■■□□□ 1.19
DDX56-207ENST00000448192 WTIPA6NIX2 430 aaPredicted RBP22.47■■□□□ 1.19
DDX56-207ENST00000448192 HIRAP54198 1017 aaPredicted RBP22.47■■□□□ 1.19
DDX56-207ENST00000448192 MPHOSPH8Q99549 860 aa22.47■■□□□ 1.19
DDX56-207ENST00000448192 PSME4Q14997 1843 aa22.46■■□□□ 1.19
DDX56-207ENST00000448192 RPS12P25398 132 aaKnown RBP22.46■■□□□ 1.19
DDX56-207ENST00000448192 CCT4P50991 539 aaKnown RBP22.46■■□□□ 1.19
DDX56-207ENST00000448192 SAMD7Q7Z3H4 446 aa22.46■■□□□ 1.19
DDX56-207ENST00000448192 ABT1Q9ULW3 272 aaKnown RBP22.46■■□□□ 1.19
DDX56-207ENST00000448192 CHMP3Q9Y3E7 222 aa22.46■■□□□ 1.19
DDX56-207ENST00000448192 CCER2I3L3R5 266 aa22.45■■□□□ 1.18
DDX56-207ENST00000448192 FOXO4P98177 505 aa22.45■■□□□ 1.18
DDX56-207ENST00000448192 SLFN5Q08AF3 891 aa22.45■■□□□ 1.18
DDX56-207ENST00000448192 TBC1D10BQ4KMP7 808 aaPredicted RBP22.45■■□□□ 1.18
DDX56-207ENST00000448192 ZC3H15Q8WU90 426 aaKnown RBP22.45■■□□□ 1.18
DDX56-207ENST00000448192 C9orf78Q9NZ63 289 aaPredicted RBP22.45■■□□□ 1.18
DDX56-207ENST00000448192 ANKRD18BA2A2Z9 1011 aa22.44■■□□□ 1.18
DDX56-207ENST00000448192 GRM8O00222 908 aa22.44■■□□□ 1.18
DDX56-207ENST00000448192 VIL1P09327 827 aaKnown RBP22.44■■□□□ 1.18
DDX56-207ENST00000448192 HSPA1AP0DMV8 641 aaKnown RBP22.44■■□□□ 1.18
DDX56-207ENST00000448192 HSPA1BP0DMV9 641 aaKnown RBP22.44■■□□□ 1.18
DDX56-207ENST00000448192 RBM26Q5T8P6 1007 aaKnown RBP22.44■■□□□ 1.18
DDX56-207ENST00000448192 GLIS2Q9BZE0 524 aaPredicted RBP22.44■■□□□ 1.18
DDX56-207ENST00000448192 SRCIN1Q9C0H9 1055 aa22.44■■□□□ 1.18
DDX56-207ENST00000448192 PGAP2Q9UHJ9 254 aa22.44■■□□□ 1.18
DDX56-207ENST00000448192 MED23Q9ULK4 1368 aa22.43■■□□□ 1.18
DDX56-207ENST00000448192 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
DDX56-207ENST00000448192 VEGFBP49765 207 aa22.43■■□□□ 1.18
DDX56-207ENST00000448192 DEFB115Q30KQ5 88 aa22.43■■□□□ 1.18
DDX56-207ENST00000448192 MRPL50Q8N5N7 158 aaKnown RBP22.43■■□□□ 1.18
DDX56-207ENST00000448192 CDCA7LQ96GN5 454 aa22.43■■□□□ 1.18
DDX56-207ENST00000448192 ANKRD2Q9GZV1 360 aa22.43■■□□□ 1.18
DDX56-207ENST00000448192 POLR2AP24928 1970 aaKnown RBP22.42■■□□□ 1.18
DDX56-207ENST00000448192 IFIT5Q13325 482 aaKnown RBP22.42■■□□□ 1.18
DDX56-207ENST00000448192 PODNQ7Z5L7 613 aa22.42■■□□□ 1.18
DDX56-207ENST00000448192 LEMD3Q9Y2U8 911 aa22.42■■□□□ 1.18
DDX56-207ENST00000448192 RASSF10A6NK89 507 aa22.41■■□□□ 1.18
DDX56-207ENST00000448192 EGFRP00533 1210 aa22.41■■□□□ 1.18
DDX56-207ENST00000448192 CST9Q5W186 159 aa22.41■■□□□ 1.18
DDX56-207ENST00000448192 RSBN1LQ6PCB5 846 aaPredicted RBP22.41■■□□□ 1.18
DDX56-207ENST00000448192 LMBR1LQ6UX01 489 aa22.41■■□□□ 1.18
DDX56-207ENST00000448192 ZNF804BA4D1E1 1349 aa22.4■■□□□ 1.18
DDX56-207ENST00000448192 KCNJ4P48050 445 aa22.4■■□□□ 1.18
DDX56-207ENST00000448192 CHRNDQ07001 517 aa22.4■■□□□ 1.18
DDX56-207ENST00000448192 EPHA10Q5JZY3 1008 aa22.4■■□□□ 1.18
DDX56-207ENST00000448192 CDC37L1Q7L3B6 337 aa22.4■■□□□ 1.18
DDX56-207ENST00000448192 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
DDX56-207ENST00000448192 USP17L3A6NCW0 530 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 USP17L4A6NCW7 530 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 CELF2O95319 508 aaKnown RBP22.39■■□□□ 1.17
DDX56-207ENST00000448192 PAXIP1Q6ZW49 1069 aaPredicted RBP22.39■■□□□ 1.17
DDX56-207ENST00000448192 USP17L1Q7RTZ2 530 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 USP48Q86UV5 1035 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 TXNRD3Q86VQ6 643 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 AGBL3Q8NEM8 1001 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 ZNF408Q9H9D4 720 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 A0A1B0GUL6 1792 aa22.39■■□□□ 1.17
DDX56-207ENST00000448192 CCDC57Q2TAC2 916 aa22.38■■□□□ 1.17
DDX56-207ENST00000448192 KIF4BQ2VIQ3 1234 aa22.38■■□□□ 1.17
DDX56-207ENST00000448192 TAF7LQ5H9L4 462 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms