RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 ECE2O60344 883 aa13.92□□□□□ -0.18
NPIPB3-202ENST00000448012 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
NPIPB3-202ENST00000448012 TTLL11Q8NHH1 800 aa13.92□□□□□ -0.18
NPIPB3-202ENST00000448012 MPHOSPH8Q99549 860 aa13.92□□□□□ -0.18
NPIPB3-202ENST00000448012 CNOT7Q9UIV1 285 aaKnown RBP13.92□□□□□ -0.18
NPIPB3-202ENST00000448012 COL4A5P29400 1685 aa13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 LAMB2P55268 1798 aa13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 MICALL2Q8IY33 904 aa13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 ZC3H15Q8WU90 426 aaKnown RBP13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 DPF2Q92785 391 aa13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 GREM2Q9H772 168 aa13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 BSDC1Q9NW68 430 aaPredicted RBP13.91□□□□□ -0.18
NPIPB3-202ENST00000448012 DDX60Q8IY21 1712 aaKnown RBP13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 E9PSI1 815 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 PSMD14O00487 310 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 KCNJ4P48050 445 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 AIDAQ96BJ3 306 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 ANKRD2Q9GZV1 360 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 C9orf78Q9NZ63 289 aaPredicted RBP13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 RTL9Q8NET4 1388 aa13.9□□□□□ -0.18
NPIPB3-202ENST00000448012 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 ANKRD18BA2A2Z9 1011 aa13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 ITGA6P23229 1130 aa13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 DEFB115Q30KQ5 88 aa13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 TAF7LQ5H9L4 462 aa13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 GPR101Q96P66 508 aaPredicted RBP13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
NPIPB3-202ENST00000448012 F6X3S4 739 aa13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 ECE1P42892 770 aa13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 IFIT5Q13325 482 aaKnown RBP13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 DCPSQ96C86 337 aaKnown RBP13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 LEMD3Q9Y2U8 911 aa13.88□□□□□ -0.19
NPIPB3-202ENST00000448012 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
NPIPB3-202ENST00000448012 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
NPIPB3-202ENST00000448012 RBM26Q5T8P6 1007 aaKnown RBP13.87□□□□□ -0.19
NPIPB3-202ENST00000448012 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
NPIPB3-202ENST00000448012 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
NPIPB3-202ENST00000448012 LRRC37AA6NMS7 1700 aa13.87□□□□□ -0.19
NPIPB3-202ENST00000448012 RASSF10A6NK89 507 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 GRM8O00222 908 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 ALDH1L1O75891 902 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 VIL1P09327 827 aaKnown RBP13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 TBC1D10BQ4KMP7 808 aaPredicted RBP13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 BEND3Q5T5X7 828 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 AGBL3Q8NEM8 1001 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 DUOX1Q9NRD9 1551 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 CEP350Q5VT06 3117 aa13.86□□□□□ -0.19
NPIPB3-202ENST00000448012 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 TRAF5O00463 557 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 CELF2O95319 508 aaKnown RBP13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 CSF1RP07333 972 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 VEGFBP49765 207 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 GRM1Q13255 1194 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 KIF4BQ2VIQ3 1234 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 IFFO2Q5TF58 517 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 RSBN1LQ6PCB5 846 aaPredicted RBP13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 TRPM4Q8TD43 1214 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 BEGAINQ9BUH8 593 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 GLIS2Q9BZE0 524 aaPredicted RBP13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 COA1Q9GZY4 146 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 PGAP2Q9UHJ9 254 aa13.85□□□□□ -0.19
NPIPB3-202ENST00000448012 KRT26Q7Z3Y9 468 aa13.84□□□□□ -0.19
NPIPB3-202ENST00000448012 SULF1Q8IWU6 871 aa13.84□□□□□ -0.19
NPIPB3-202ENST00000448012 OGFOD1Q8N543 542 aa13.84□□□□□ -0.19
NPIPB3-202ENST00000448012 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
NPIPB3-202ENST00000448012 PTPRCP08575 1304 aa13.84□□□□□ -0.19
NPIPB3-202ENST00000448012 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
NPIPB3-202ENST00000448012 ZNF521Q96K83 1311 aa13.84□□□□□ -0.19
NPIPB3-202ENST00000448012 ADAMTSL1Q8N6G6 1762 aa13.83□□□□□ -0.19
NPIPB3-202ENST00000448012 USP17L8P0C7I0 530 aa13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 CASP7P55210 303 aa13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 MAP2K1Q02750 393 aaPredicted RBP13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 LMBR1LQ6UX01 489 aa13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 USP48Q86UV5 1035 aa13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 KCNQ5Q9NR82 932 aa13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 CNNM1Q9NRU3 951 aa13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 WDR33Q9C0J8 1336 aaKnown RBP13.83□□□□□ -0.2
NPIPB3-202ENST00000448012 TAF1P21675 1872 aa13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 LTBP1Q14766 1721 aa13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 CHRNDQ07001 517 aa13.82□□□□□ -0.2
NPIPB3-202ENST00000448012 SLFN5Q08AF3 891 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms