RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 BAG6P46379 1132 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 SYCP3Q8IZU3 236 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 RBM25P49756 843 aaKnown RBP20.52■□□□□ 0.88
ATG9A-215ENST00000446716 JAKMIP3Q5VZ66 844 aa20.52■□□□□ 0.88
ATG9A-215ENST00000446716 SLC52A2Q9HAB3 445 aa20.52■□□□□ 0.88
ATG9A-215ENST00000446716 PLS1Q14651 629 aa20.52■□□□□ 0.88
ATG9A-215ENST00000446716 IL13P35225 146 aa20.52■□□□□ 0.88
ATG9A-215ENST00000446716 AXDND1Q5T1B0 1012 aaPredicted RBP20.52■□□□□ 0.88
ATG9A-215ENST00000446716 SMARCC2Q8TAQ2 1214 aa20.52■□□□□ 0.88
ATG9A-215ENST00000446716 SSFA2P28290 1259 aa20.52■□□□□ 0.88
ATG9A-215ENST00000446716 BABAM1Q9NWV8 329 aa20.52■□□□□ 0.88
ATG9A-215ENST00000446716 SFPQP23246 707 aaKnown RBP eCLIP20.51■□□□□ 0.87
ATG9A-215ENST00000446716 NMIQ13287 307 aaPredicted RBP20.51■□□□□ 0.87
ATG9A-215ENST00000446716 ENOX2Q16206 610 aaKnown RBP20.51■□□□□ 0.87
ATG9A-215ENST00000446716 VTI1AQ96AJ9 217 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 ESYT1Q9BSJ8 1104 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 ALG1Q9BT22 464 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 PIK3C2GO75747 1445 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 TBCAO75347 108 aaKnown RBP20.51■□□□□ 0.87
ATG9A-215ENST00000446716 CEP85Q6P2H3 762 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 TBC1D2Q9BYX2 928 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 COL17A1Q9UMD9 1497 aaPredicted RBP20.51■□□□□ 0.87
ATG9A-215ENST00000446716 A1BGP04217 495 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 CCDC112Q8NEF3 446 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 MAPKBP1O60336 1514 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 GOLGA6L10A6NI86 522 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 NAPAP54920 295 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 SEPT7Q16181 437 aaKnown RBP20.51■□□□□ 0.87
ATG9A-215ENST00000446716 LRRC27Q9C0I9 530 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 LGR6Q9HBX8 967 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 DDX19AQ9NUU7 478 aaKnown RBP20.51■□□□□ 0.87
ATG9A-215ENST00000446716 DENND2AQ9ULE3 1009 aa20.51■□□□□ 0.87
ATG9A-215ENST00000446716 MTIF2P46199 727 aaKnown RBP20.5■□□□□ 0.87
ATG9A-215ENST00000446716 DNAJC10Q8IXB1 793 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 ARHGEF12Q9NZN5 1544 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 B4DLN1 442 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 ITGA6P23229 1130 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 MRPL12P52815 198 aaKnown RBP20.5■□□□□ 0.87
ATG9A-215ENST00000446716 IQCEQ6IPM2 695 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 NECAB1Q8N987 351 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
ATG9A-215ENST00000446716 ZFYVE16Q7Z3T8 1539 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 TTC6Q86TZ1 520 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 CCDC191Q8NCU4 936 aa20.5■□□□□ 0.87
ATG9A-215ENST00000446716 PRC1O43663 620 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 HOXB7P09629 217 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 MAST1Q9Y2H9 1570 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 H0YIN7 160 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 PLEKHG3A1L390 1219 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 PDE8AO60658 829 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 GGA1Q9UJY5 639 aa20.49■□□□□ 0.87
ATG9A-215ENST00000446716 EYA2O00167 538 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 BIN1O00499 593 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 BMP15O95972 392 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
ATG9A-215ENST00000446716 CCDC102BQ68D86 513 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 BICD1Q96G01 975 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
ATG9A-215ENST00000446716 HIBADHP31937 336 aaKnown RBP20.48■□□□□ 0.87
ATG9A-215ENST00000446716 ZSCAN16Q9H4T2 348 aaPredicted RBP20.48■□□□□ 0.87
ATG9A-215ENST00000446716 CALM1P0DP23 149 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 CALM2P0DP24 149 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 CALM3P0DP25 149 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 TDRD12Q587J7 1177 aaKnown RBP20.48■□□□□ 0.87
ATG9A-215ENST00000446716 KANK3Q6NY19 840 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 IL27Q8NEV9 243 aa20.48■□□□□ 0.87
ATG9A-215ENST00000446716 DCTPP1Q9H773 170 aa20.47■□□□□ 0.87
ATG9A-215ENST00000446716 Q6ZUG5 572 aa20.47■□□□□ 0.87
ATG9A-215ENST00000446716 RBM27Q9P2N5 1060 aaKnown RBP20.47■□□□□ 0.87
ATG9A-215ENST00000446716 TEX11Q8IYF3 940 aa20.47■□□□□ 0.87
ATG9A-215ENST00000446716 USP8P40818 1118 aa20.46■□□□□ 0.87
ATG9A-215ENST00000446716 G2E3Q7L622 706 aa20.46■□□□□ 0.87
ATG9A-215ENST00000446716 LARGE2Q8N3Y3 721 aa20.46■□□□□ 0.87
ATG9A-215ENST00000446716 SPDYE3A6NKU9 549 aa20.46■□□□□ 0.87
ATG9A-215ENST00000446716 C6orf50Q9HD87 102 aa20.46■□□□□ 0.87
ATG9A-215ENST00000446716 PZPP20742 1482 aa20.46■□□□□ 0.87
ATG9A-215ENST00000446716 ANKRD62A6NC57 917 aa20.46■□□□□ 0.87
ATG9A-215ENST00000446716 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
ATG9A-215ENST00000446716 ECM2O94769 699 aaPredicted RBP20.45■□□□□ 0.86
ATG9A-215ENST00000446716 TNNQ9UQP3 1299 aa20.45■□□□□ 0.86
ATG9A-215ENST00000446716 ERLIN1O75477 346 aa20.45■□□□□ 0.86
ATG9A-215ENST00000446716 RRP36Q96EU6 259 aaKnown RBP20.45■□□□□ 0.86
ATG9A-215ENST00000446716 TMX3Q96JJ7 454 aa20.45■□□□□ 0.86
ATG9A-215ENST00000446716 PUM3Q15397 648 aaKnown RBP20.45■□□□□ 0.86
ATG9A-215ENST00000446716 CCDC174Q6PII3 467 aa20.45■□□□□ 0.86
ATG9A-215ENST00000446716 DRC1Q96MC2 740 aa20.45■□□□□ 0.86
ATG9A-215ENST00000446716 ANAPC15P60006 121 aa20.45■□□□□ 0.86
ATG9A-215ENST00000446716 NUP88Q99567 741 aaPredicted RBP20.45■□□□□ 0.86
ATG9A-215ENST00000446716 RTL9Q8NET4 1388 aa20.45■□□□□ 0.86
ATG9A-215ENST00000446716 A0A1B0GUL7 405 aa20.44■□□□□ 0.86
ATG9A-215ENST00000446716 EIF6P56537 245 aaKnown RBP20.44■□□□□ 0.86
ATG9A-215ENST00000446716 TIMM10P62072 90 aa20.44■□□□□ 0.86
ATG9A-215ENST00000446716 ZNF496Q96IT1 587 aaPredicted RBP20.44■□□□□ 0.86
ATG9A-215ENST00000446716 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
ATG9A-215ENST00000446716 MBD4O95243 580 aa20.44■□□□□ 0.86
ATG9A-215ENST00000446716 CCDC24Q8N4L8 307 aa20.44■□□□□ 0.86
ATG9A-215ENST00000446716 DNMT1P26358 1616 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms