RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CTIFO43310 598 aaKnown RBP16.73■□□□□ 0.27
ERCC3-203ENST00000445889 TIMM10P62072 90 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 NEXNQ0ZGT2 675 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
ERCC3-203ENST00000445889 MED23Q9ULK4 1368 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 TNNI3KQ59H18 835 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 GJB4Q9NTQ9 266 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 FPGT-TNNI3KV9GXZ4 949 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 BECN2A8MW95 431 aa16.73■□□□□ 0.27
ERCC3-203ENST00000445889 TDRD7Q8NHU6 1098 aaKnown RBP16.73■□□□□ 0.27
ERCC3-203ENST00000445889 GOLIM4O00461 696 aa16.72■□□□□ 0.27
ERCC3-203ENST00000445889 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
ERCC3-203ENST00000445889 ISM2Q6H9L7 571 aa16.72■□□□□ 0.27
ERCC3-203ENST00000445889 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
ERCC3-203ENST00000445889 ME1P48163 572 aa16.72■□□□□ 0.27
ERCC3-203ENST00000445889 ZNF496Q96IT1 587 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-203ENST00000445889 IQCB1Q15051 598 aa16.71■□□□□ 0.27
ERCC3-203ENST00000445889 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
ERCC3-203ENST00000445889 CCDC112Q8NEF3 446 aa16.71■□□□□ 0.27
ERCC3-203ENST00000445889 ADD1P35611 737 aaKnown RBP16.71■□□□□ 0.27
ERCC3-203ENST00000445889 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
ERCC3-203ENST00000445889 ZNF790Q6PG37 636 aa16.71■□□□□ 0.27
ERCC3-203ENST00000445889 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
ERCC3-203ENST00000445889 ZNF609O15014 1411 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 BIN1O00499 593 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 SKILP12757 684 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 AMOTQ4VCS5 1084 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 A0A087WZG4 1122 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 A0A1B0GVL5 298 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
ERCC3-203ENST00000445889 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
ERCC3-203ENST00000445889 PTPN21Q16825 1174 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 HSP90AB3PQ58FF7 597 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 CEP135Q66GS9 1140 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 RBM43Q6ZSC3 357 aaKnown RBP16.69■□□□□ 0.26
ERCC3-203ENST00000445889 NSUN7Q8NE18 718 aaKnown RBP16.69■□□□□ 0.26
ERCC3-203ENST00000445889 NLRP2Q9NX02 1062 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 HMG20BQ9P0W2 317 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 SMTNL1A8MU46 457 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 HAND2P61296 217 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 AOPEPQ8N6M6 819 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
ERCC3-203ENST00000445889 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
ERCC3-203ENST00000445889 ATP5JP18859 108 aa16.68■□□□□ 0.26
ERCC3-203ENST00000445889 SNW1Q13573 536 aaKnown RBP16.68■□□□□ 0.26
ERCC3-203ENST00000445889 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-203ENST00000445889 SNRKQ9NRH2 765 aa16.68■□□□□ 0.26
ERCC3-203ENST00000445889 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
ERCC3-203ENST00000445889 ARHGEF25Q86VW2 580 aa16.68■□□□□ 0.26
ERCC3-203ENST00000445889 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-203ENST00000445889 ZNF215Q9UL58 517 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-203ENST00000445889 RFX5P48382 616 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-203ENST00000445889 KCNH5Q8NCM2 988 aa16.67■□□□□ 0.26
ERCC3-203ENST00000445889 SDF4Q9BRK5 362 aa16.67■□□□□ 0.26
ERCC3-203ENST00000445889 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-203ENST00000445889 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
ERCC3-203ENST00000445889 KINO60870 393 aaKnown RBP16.67■□□□□ 0.26
ERCC3-203ENST00000445889 KRT32Q14532 448 aa16.67■□□□□ 0.26
ERCC3-203ENST00000445889 CCDC73Q6ZRK6 1079 aa16.67■□□□□ 0.26
ERCC3-203ENST00000445889 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
ERCC3-203ENST00000445889 UTYO14607 1347 aa16.66■□□□□ 0.26
ERCC3-203ENST00000445889 TSGA10IPQ3SY00 556 aa16.66■□□□□ 0.26
ERCC3-203ENST00000445889 DHX40Q8IX18 779 aaKnown RBP16.66■□□□□ 0.26
ERCC3-203ENST00000445889 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
ERCC3-203ENST00000445889 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
ERCC3-203ENST00000445889 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
ERCC3-203ENST00000445889 CTNNA3Q9UI47 895 aa16.66■□□□□ 0.26
ERCC3-203ENST00000445889 PTPN14Q15678 1187 aa16.65■□□□□ 0.26
ERCC3-203ENST00000445889 ZNF771Q7L3S4 317 aaPredicted RBP16.65■□□□□ 0.26
ERCC3-203ENST00000445889 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.65■□□□□ 0.26
ERCC3-203ENST00000445889 ZSCAN16Q9H4T2 348 aaPredicted RBP16.65■□□□□ 0.26
ERCC3-203ENST00000445889 CRYBG1Q9Y4K1 1723 aa16.65■□□□□ 0.26
ERCC3-203ENST00000445889 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
ERCC3-203ENST00000445889 STX1AQ16623 288 aa16.65■□□□□ 0.26
ERCC3-203ENST00000445889 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
ERCC3-203ENST00000445889 RCOR1Q9UKL0 485 aa16.65■□□□□ 0.26
ERCC3-203ENST00000445889 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
ERCC3-203ENST00000445889 PCDHA7Q9UN72 937 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 PFKFB2O60825 505 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 PDIA4P13667 645 aaKnown RBP16.64■□□□□ 0.25
ERCC3-203ENST00000445889 NDUFA8P51970 172 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 HAUS7Q99871 368 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 ALDH8A1Q9H2A2 487 aaPredicted RBP16.64■□□□□ 0.25
ERCC3-203ENST00000445889 CLIC4Q9Y696 253 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 RGPD2P0DJD1 1756 aa16.64■□□□□ 0.25
ERCC3-203ENST00000445889 E7EWF7 191 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 DPCR1Q3MIW9 517 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 SMARCC2Q8TAQ2 1214 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 OGFRQ9NZT2 677 aa16.63■□□□□ 0.25
ERCC3-203ENST00000445889 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms