RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
NCLP1-201ENST00000445357 CSF1RP07333 972 aa16.86■□□□□ 0.29
NCLP1-201ENST00000445357 TIMM10P62072 90 aa16.86■□□□□ 0.29
NCLP1-201ENST00000445357 ZBTB38Q8NAP3 1195 aaPredicted RBP16.86■□□□□ 0.29
NCLP1-201ENST00000445357 SEC62Q99442 399 aaKnown RBP16.86■□□□□ 0.29
NCLP1-201ENST00000445357 RBSNQ9H1K0 784 aa16.86■□□□□ 0.29
NCLP1-201ENST00000445357 GOLIM4O00461 696 aa16.85■□□□□ 0.29
NCLP1-201ENST00000445357 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
NCLP1-201ENST00000445357 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
NCLP1-201ENST00000445357 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
NCLP1-201ENST00000445357 GIGYF2Q6Y7W6 1299 aaKnown RBP16.85■□□□□ 0.29
NCLP1-201ENST00000445357 NECAB1Q8N987 351 aa16.85■□□□□ 0.29
NCLP1-201ENST00000445357 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
NCLP1-201ENST00000445357 CEP126Q9P2H0 1117 aa16.85■□□□□ 0.29
NCLP1-201ENST00000445357 SYCE3A1L190 88 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 CHGBP05060 677 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 ILDR2Q71H61 639 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 NEK1Q96PY6 1258 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 GDPD2Q9HCC8 539 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 CNPY2Q9Y2B0 182 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 IFIT1P09914 478 aaKnown RBP16.84■□□□□ 0.29
NCLP1-201ENST00000445357 HSP90AB3PQ58FF7 597 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 ANP32BQ92688 251 aaKnown RBP16.84■□□□□ 0.29
NCLP1-201ENST00000445357 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
NCLP1-201ENST00000445357 CYP21A2P08686 494 aa16.83■□□□□ 0.28
NCLP1-201ENST00000445357 CYP19A1P11511 503 aaPredicted RBP16.83■□□□□ 0.28
NCLP1-201ENST00000445357 PDCP20941 246 aa16.83■□□□□ 0.28
NCLP1-201ENST00000445357 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.28
NCLP1-201ENST00000445357 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.28
NCLP1-201ENST00000445357 KAT6BQ8WYB5 2073 aa16.83■□□□□ 0.28
NCLP1-201ENST00000445357 RIC1Q4ADV7 1423 aa16.83■□□□□ 0.28
NCLP1-201ENST00000445357 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
NCLP1-201ENST00000445357 PHF14O94880 888 aa16.82■□□□□ 0.28
NCLP1-201ENST00000445357 UBE2HP62256 183 aa16.82■□□□□ 0.28
NCLP1-201ENST00000445357 CSPP1Q1MSJ5 1256 aa16.82■□□□□ 0.28
NCLP1-201ENST00000445357 TCEANC2Q96MN5 208 aa16.82■□□□□ 0.28
NCLP1-201ENST00000445357 SLC4A9Q96Q91 983 aa16.82■□□□□ 0.28
NCLP1-201ENST00000445357 ZNF330Q9Y3S2 320 aaPredicted RBP16.82■□□□□ 0.28
NCLP1-201ENST00000445357 NLRP10Q86W26 655 aa16.82■□□□□ 0.28
NCLP1-201ENST00000445357 TRIM44Q96DX7 344 aaPredicted RBP16.82■□□□□ 0.28
NCLP1-201ENST00000445357 CICQ96RK0 1608 aaPredicted RBP16.82■□□□□ 0.28
NCLP1-201ENST00000445357 AKAP11Q9UKA4 1901 aa16.81■□□□□ 0.28
NCLP1-201ENST00000445357 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
NCLP1-201ENST00000445357 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
NCLP1-201ENST00000445357 FAM89AQ96GI7 184 aa16.81■□□□□ 0.28
NCLP1-201ENST00000445357 CCDC9Q9Y3X0 531 aaKnown RBP16.81■□□□□ 0.28
NCLP1-201ENST00000445357 LRP5O75197 1615 aa16.81■□□□□ 0.28
NCLP1-201ENST00000445357 RREB1Q92766 1687 aa16.81■□□□□ 0.28
NCLP1-201ENST00000445357 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
NCLP1-201ENST00000445357 CLCN1P35523 988 aa16.8■□□□□ 0.28
NCLP1-201ENST00000445357 IFIT5Q13325 482 aaKnown RBP16.8■□□□□ 0.28
NCLP1-201ENST00000445357 LARP1BQ659C4 914 aaKnown RBP16.8■□□□□ 0.28
NCLP1-201ENST00000445357 EXOC5O00471 708 aa16.8■□□□□ 0.28
NCLP1-201ENST00000445357 HLFQ16534 295 aa16.8■□□□□ 0.28
NCLP1-201ENST00000445357 CCDC158Q5M9N0 1113 aa16.8■□□□□ 0.28
NCLP1-201ENST00000445357 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
NCLP1-201ENST00000445357 GTF3C6Q969F1 213 aa16.8■□□□□ 0.28
NCLP1-201ENST00000445357 PDLIM2Q96JY6 352 aa16.8■□□□□ 0.28
NCLP1-201ENST00000445357 MAST3O60307 1309 aa16.8■□□□□ 0.28
NCLP1-201ENST00000445357 VPS37CA5D8V6 355 aaPredicted RBP16.79■□□□□ 0.28
NCLP1-201ENST00000445357 ESPNB1AK53 854 aa16.79■□□□□ 0.28
NCLP1-201ENST00000445357 LRRFIP1Q32MZ4 808 aaKnown RBP16.79■□□□□ 0.28
NCLP1-201ENST00000445357 STOX1Q6ZVD7 989 aa16.79■□□□□ 0.28
NCLP1-201ENST00000445357 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
NCLP1-201ENST00000445357 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
NCLP1-201ENST00000445357 NWD2Q9ULI1 1742 aa16.79■□□□□ 0.28
NCLP1-201ENST00000445357 ERVV-1B6SEH8 477 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 DNM1Q05193 864 aaKnown RBP16.78■□□□□ 0.28
NCLP1-201ENST00000445357 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 TSPY26PQ9H489 355 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 ZBTB1Q9Y2K1 713 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 FIBPO43427 364 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 ADORA1P30542 326 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
NCLP1-201ENST00000445357 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 TTC39AQ5SRH9 613 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 Q6ZUG5 572 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 TTLL11Q8NHH1 800 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 CDCA7Q9BWT1 371 aaPredicted RBP16.78■□□□□ 0.28
NCLP1-201ENST00000445357 RIPOR2Q9Y4F9 1068 aa16.78■□□□□ 0.28
NCLP1-201ENST00000445357 DDX60Q8IY21 1712 aaKnown RBP16.78■□□□□ 0.28
NCLP1-201ENST00000445357 MYH15Q9Y2K3 1946 aa16.77■□□□□ 0.28
NCLP1-201ENST00000445357 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
NCLP1-201ENST00000445357 ZFYP08048 801 aaPredicted RBP16.77■□□□□ 0.28
NCLP1-201ENST00000445357 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
NCLP1-201ENST00000445357 CTSWP56202 376 aa16.77■□□□□ 0.28
NCLP1-201ENST00000445357 AGXT2Q9BYV1 514 aa16.77■□□□□ 0.28
NCLP1-201ENST00000445357 SLFNL1Q499Z3 407 aa16.77■□□□□ 0.27
NCLP1-201ENST00000445357 GORABQ5T7V8 394 aa16.77■□□□□ 0.27
NCLP1-201ENST00000445357 CDC37L1Q7L3B6 337 aa16.77■□□□□ 0.27
NCLP1-201ENST00000445357 DHX32Q7L7V1 743 aaKnown RBP16.77■□□□□ 0.27
NCLP1-201ENST00000445357 ELP1O95163 1332 aa16.76■□□□□ 0.27
NCLP1-201ENST00000445357 GPTP24298 496 aa16.76■□□□□ 0.27
NCLP1-201ENST00000445357 EXOSC10Q01780 885 aaKnown RBP16.76■□□□□ 0.27
NCLP1-201ENST00000445357 HS1BP3Q53T59 392 aa16.76■□□□□ 0.27
NCLP1-201ENST00000445357 M0R2C6 588 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms