RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 DDX60LQ5H9U9 1706 aaKnown RBP9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 CEP290O15078 2479 aa9.21□□□□□ -0.94
BRAFP1-201ENST00000445336 NUBP1P53384 320 aa9.2□□□□□ -0.94
BRAFP1-201ENST00000445336 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
BRAFP1-201ENST00000445336 NME9Q86XW9 330 aa9.2□□□□□ -0.94
BRAFP1-201ENST00000445336 ATRNL1Q5VV63 1379 aa9.2□□□□□ -0.94
BRAFP1-201ENST00000445336 USP38Q8NB14 1042 aa9.2□□□□□ -0.94
BRAFP1-201ENST00000445336 SRRDQ9UH36 339 aa9.19□□□□□ -0.94
BRAFP1-201ENST00000445336 ALADP13716 330 aa9.19□□□□□ -0.94
BRAFP1-201ENST00000445336 KIF4BQ2VIQ3 1234 aa9.19□□□□□ -0.94
BRAFP1-201ENST00000445336 WNK4Q96J92 1243 aa9.19□□□□□ -0.94
BRAFP1-201ENST00000445336 PAK6Q9NQU5 681 aaPredicted RBP9.19□□□□□ -0.94
BRAFP1-201ENST00000445336 PXYLP1Q8TE99 480 aa9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 DACH1Q9UI36 760 aa9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 KMT2BQ9UMN6 2715 aaPredicted RBP9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 SH3TC2Q8TF17 1288 aa9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 GAS2L1Q99501 681 aaPredicted RBP9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 TTC28Q96AY4 2481 aa9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 MPHOSPH9Q99550 1183 aa9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 COG5Q9UP83 839 aa9.18□□□□□ -0.94
BRAFP1-201ENST00000445336 CABP4P57796 275 aa9.17□□□□□ -0.94
BRAFP1-201ENST00000445336 TMC4Q7Z404 712 aa9.17□□□□□ -0.94
BRAFP1-201ENST00000445336 TEX13AQ9BXU3 409 aaPredicted RBP9.17□□□□□ -0.94
BRAFP1-201ENST00000445336 RNF208Q9H0X6 261 aa9.17□□□□□ -0.94
BRAFP1-201ENST00000445336 MTFR1Q15390 333 aa9.17□□□□□ -0.94
BRAFP1-201ENST00000445336 NBPF3Q9H094 633 aa9.17□□□□□ -0.94
BRAFP1-201ENST00000445336 GGA3Q9NZ52 723 aa9.17□□□□□ -0.94
BRAFP1-201ENST00000445336 IL6STP40189 918 aaPredicted RBP9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 LACTBP83111 547 aaPredicted RBP9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 COG3Q96JB2 828 aa9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 MFSD14AQ96MC6 490 aa9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 MGAMO43451 1857 aa9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 ERC2O15083 957 aa9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 ID4P47928 161 aa9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 C11orf49Q9H6J7 331 aa9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 ZMYND8Q9ULU4 1186 aaPredicted RBP9.16□□□□□ -0.94
BRAFP1-201ENST00000445336 UBE2Q2LH0YL09 131 aa9.15□□□□□ -0.94
BRAFP1-201ENST00000445336 IRF5Q13568 498 aa9.15□□□□□ -0.94
BRAFP1-201ENST00000445336 RIPOR2Q9Y4F9 1068 aa9.15□□□□□ -0.94
BRAFP1-201ENST00000445336 ANKRD36CQ5JPF3 1778 aa9.15□□□□□ -0.94
BRAFP1-201ENST00000445336 PRAMEF22A3QJZ6 481 aa9.15□□□□□ -0.95
BRAFP1-201ENST00000445336 LBHD1Q9BQE6 289 aaPredicted RBP9.15□□□□□ -0.95
BRAFP1-201ENST00000445336 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.95
BRAFP1-201ENST00000445336 ZNF652Q9Y2D9 606 aa9.15□□□□□ -0.95
BRAFP1-201ENST00000445336 MUC6Q6W4X9 2439 aa9.15□□□□□ -0.95
BRAFP1-201ENST00000445336 PPP2R3BQ9Y5P8 575 aa9.14□□□□□ -0.95
BRAFP1-201ENST00000445336 BAHCC1Q9P281 2608 aa9.14□□□□□ -0.95
BRAFP1-201ENST00000445336 GFRA3O60609 400 aa9.14□□□□□ -0.95
BRAFP1-201ENST00000445336 TFRCP02786 760 aaKnown RBP9.14□□□□□ -0.95
BRAFP1-201ENST00000445336 AMOTQ4VCS5 1084 aa9.14□□□□□ -0.95
BRAFP1-201ENST00000445336 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
BRAFP1-201ENST00000445336 RBM17Q96I25 401 aaKnown RBP9.13□□□□□ -0.95
BRAFP1-201ENST00000445336 ATP6V0A2Q9Y487 856 aa9.13□□□□□ -0.95
BRAFP1-201ENST00000445336 CAP1Q01518 475 aa9.13□□□□□ -0.95
BRAFP1-201ENST00000445336 MTMR14Q8NCE2 650 aa9.13□□□□□ -0.95
BRAFP1-201ENST00000445336 ZNF496Q96IT1 587 aaPredicted RBP9.13□□□□□ -0.95
BRAFP1-201ENST00000445336 MYPNQ86TC9 1320 aa9.13□□□□□ -0.95
BRAFP1-201ENST00000445336 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 PTPN12Q05209 780 aaKnown RBP9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 DNAJC10Q8IXB1 793 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 ZBTB1Q9Y2K1 713 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 STARD3NLO95772 234 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 HERVK_113Q902F9 699 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 PAWRQ96IZ0 340 aaKnown RBP9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 FAM161BQ96MY7 647 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 NYXQ9GZU5 481 aa9.12□□□□□ -0.95
BRAFP1-201ENST00000445336 SOBPA7XYQ1 873 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 NPHP1O15259 732 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 TLL1O43897 1013 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 AOC3Q16853 763 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 BMP8AQ7Z5Y6 402 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 NBPF5PQ86XG9 351 aaPredicted RBP9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 RAET1EQ8TD07 263 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 ST3GAL2Q16842 350 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 USHBP1Q8N6Y0 703 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 ECM29Q5VYK3 1845 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 KIF20BQ96Q89 1820 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 PLXNA3P51805 1871 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 TLR2O60603 784 aa9.11□□□□□ -0.95
BRAFP1-201ENST00000445336 VIL1P09327 827 aaKnown RBP9.1□□□□□ -0.95
BRAFP1-201ENST00000445336 TBC1D10BQ4KMP7 808 aaPredicted RBP9.1□□□□□ -0.95
BRAFP1-201ENST00000445336 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
BRAFP1-201ENST00000445336 APOBEC3FQ8IUX4 373 aaKnown RBP9.1□□□□□ -0.95
BRAFP1-201ENST00000445336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRAFP1-201ENST00000445336 SP8Q8IXZ3 490 aa9.1□□□□□ -0.95
BRAFP1-201ENST00000445336 A0A0G2JMZ2 1700 aa9.09□□□□□ -0.95
BRAFP1-201ENST00000445336 COL6A1P12109 1028 aa9.09□□□□□ -0.95
BRAFP1-201ENST00000445336 UNC93B1Q9H1C4 597 aa9.09□□□□□ -0.95
BRAFP1-201ENST00000445336 OGDHLQ9ULD0 1010 aa9.09□□□□□ -0.95
BRAFP1-201ENST00000445336 PLEKHO1Q53GL0 409 aaPredicted RBP9.09□□□□□ -0.95
BRAFP1-201ENST00000445336 COL6A3P12111 3177 aa9.08□□□□□ -0.96
BRAFP1-201ENST00000445336 SCARF1Q14162 830 aa9.08□□□□□ -0.96
BRAFP1-201ENST00000445336 DSG3P32926 999 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 GTF2A2P52657 109 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 TAF1CQ15572 869 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms