RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 ZNF710Q8N1W2 664 aa13.58□□□□□ -0.23
HCFC1-203ENST00000444191 MAP4K1Q92918 833 aa13.58□□□□□ -0.23
HCFC1-203ENST00000444191 GPHNQ9NQX3 736 aaPredicted RBP13.58□□□□□ -0.23
HCFC1-203ENST00000444191 ARAP3Q8WWN8 1544 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 AOX1Q06278 1338 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.24
HCFC1-203ENST00000444191 ALDH1L1O75891 902 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 POLA2Q14181 598 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
HCFC1-203ENST00000444191 ZNF215Q9UL58 517 aaPredicted RBP13.58□□□□□ -0.24
HCFC1-203ENST00000444191 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 PIK3C2BO00750 1634 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 SLC3A2P08195 630 aaKnown RBP13.58□□□□□ -0.24
HCFC1-203ENST00000444191 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.24
HCFC1-203ENST00000444191 MICU3Q86XE3 530 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 GTF3C6Q969F1 213 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 CEP126Q9P2H0 1117 aa13.58□□□□□ -0.24
HCFC1-203ENST00000444191 ABCA9Q8IUA7 1624 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 EPHA10Q5JZY3 1008 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 CPLX3Q8WVH0 158 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 DNAI1Q9UI46 699 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 GCP02774 474 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 CCDC144BQ3MJ40 725 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 LMTK2Q8IWU2 1503 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 ZSCAN20P17040 1043 aaPredicted RBP13.57□□□□□ -0.24
HCFC1-203ENST00000444191 KLHL10Q6JEL2 608 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 CPLX2Q6PUV4 134 aaKnown RBP13.57□□□□□ -0.24
HCFC1-203ENST00000444191 IP6K1Q92551 441 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 DBNLQ9UJU6 430 aaKnown RBP13.57□□□□□ -0.24
HCFC1-203ENST00000444191 TCHHQ07283 1943 aa13.57□□□□□ -0.24
HCFC1-203ENST00000444191 USP27XA6NNY8 438 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 CYP21A2P08686 494 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 SPECC1Q5M775 1068 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 A2ML1A8K2U0 1454 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 SCRN1Q12765 414 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 TNNI3KQ59H18 835 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 FPGT-TNNI3KV9GXZ4 949 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 SMTNL1A8MU46 457 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 TAF5LO75529 589 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 GPTP24298 496 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 CCDC158Q5M9N0 1113 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 UBXN4Q92575 508 aa13.56□□□□□ -0.24
HCFC1-203ENST00000444191 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
HCFC1-203ENST00000444191 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
HCFC1-203ENST00000444191 PROSER2Q86WR7 435 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-203ENST00000444191 NUP133Q8WUM0 1156 aa13.55□□□□□ -0.24
HCFC1-203ENST00000444191 TM6SF1Q9BZW5 370 aa13.55□□□□□ -0.24
HCFC1-203ENST00000444191 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
HCFC1-203ENST00000444191 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-203ENST00000444191 KCNH5Q8NCM2 988 aa13.55□□□□□ -0.24
HCFC1-203ENST00000444191 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
HCFC1-203ENST00000444191 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-203ENST00000444191 DHX32Q7L7V1 743 aaKnown RBP13.54□□□□□ -0.24
HCFC1-203ENST00000444191 PAG1Q9NWQ8 432 aa13.54□□□□□ -0.24
HCFC1-203ENST00000444191 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
HCFC1-203ENST00000444191 ZBTB22O15209 634 aa13.54□□□□□ -0.24
HCFC1-203ENST00000444191 GCKRQ14397 625 aa13.54□□□□□ -0.24
HCFC1-203ENST00000444191 TEX35Q5T0J7 233 aa13.54□□□□□ -0.24
HCFC1-203ENST00000444191 MRPS27Q92552 414 aaKnown RBP13.54□□□□□ -0.24
HCFC1-203ENST00000444191 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
HCFC1-203ENST00000444191 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
HCFC1-203ENST00000444191 PAXBP1Q9Y5B6 917 aa13.54□□□□□ -0.24
HCFC1-203ENST00000444191 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
HCFC1-203ENST00000444191 TMEM87AQ8NBN3 555 aa13.53□□□□□ -0.24
HCFC1-203ENST00000444191 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
HCFC1-203ENST00000444191 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
HCFC1-203ENST00000444191 GTF2F1P35269 517 aaKnown RBP eCLIP13.53□□□□□ -0.24
HCFC1-203ENST00000444191 TNNT3P45378 269 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-203ENST00000444191 TSPOAP1O95153 1857 aa13.53□□□□□ -0.24
HCFC1-203ENST00000444191 ERCC6LQ2NKX8 1250 aa13.53□□□□□ -0.24
HCFC1-203ENST00000444191 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
HCFC1-203ENST00000444191 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.24
HCFC1-203ENST00000444191 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.24
HCFC1-203ENST00000444191 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
HCFC1-203ENST00000444191 ST3GAL1Q11201 340 aa13.52□□□□□ -0.25
HCFC1-203ENST00000444191 LRRC8AQ8IWT6 810 aa13.52□□□□□ -0.25
HCFC1-203ENST00000444191 ZNF213O14771 459 aa13.52□□□□□ -0.25
HCFC1-203ENST00000444191 NCBP1Q09161 790 aaKnown RBP13.52□□□□□ -0.25
HCFC1-203ENST00000444191 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.25
HCFC1-203ENST00000444191 CTAGE5O15320 804 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 ARHGAP29Q52LW3 1261 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 UTP14AQ9BVJ6 771 aaKnown RBP13.51□□□□□ -0.25
HCFC1-203ENST00000444191 NEO1Q92859 1461 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 SPTLC2O15270 562 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 PRC1O43663 620 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-203ENST00000444191 UBASH3AP57075 661 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 FAM160A1Q05DH4 1040 aa13.51□□□□□ -0.25
HCFC1-203ENST00000444191 ARGLU1Q9NWB6 273 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms