RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ABL1P00519 1130 aa8.95□□□□□ -0.98
VPS50-206ENST00000443443 DOC2BQ14184 412 aa8.95□□□□□ -0.98
VPS50-206ENST00000443443 C8orf34Q49A92 452 aa8.95□□□□□ -0.98
VPS50-206ENST00000443443 EDEM1Q92611 657 aa8.95□□□□□ -0.98
VPS50-206ENST00000443443 SPACA7Q96KW9 195 aa8.95□□□□□ -0.98
VPS50-206ENST00000443443 ELNP15502 786 aa8.94□□□□□ -0.98
VPS50-206ENST00000443443 MPSTP25325 297 aa8.94□□□□□ -0.98
VPS50-206ENST00000443443 SOX18P35713 384 aa8.94□□□□□ -0.98
VPS50-206ENST00000443443 XP32Q5T750 250 aa8.94□□□□□ -0.98
VPS50-206ENST00000443443 TTC9Q92623 222 aa8.94□□□□□ -0.98
VPS50-206ENST00000443443 C9orf172C9J069 976 aa8.93□□□□□ -0.98
VPS50-206ENST00000443443 K7ELQ4 463 aaPredicted RBP8.93□□□□□ -0.98
VPS50-206ENST00000443443 RPLP1P05386 114 aaKnown RBP8.93□□□□□ -0.98
VPS50-206ENST00000443443 EIF1AXP47813 144 aaKnown RBP8.93□□□□□ -0.98
VPS50-206ENST00000443443 HYAL2Q12891 473 aa8.93□□□□□ -0.98
VPS50-206ENST00000443443 GRIK5Q16478 980 aa8.93□□□□□ -0.98
VPS50-206ENST00000443443 ZNF438Q7Z4V0 828 aa8.93□□□□□ -0.98
VPS50-206ENST00000443443 OR13H1Q8NG92 308 aa8.93□□□□□ -0.98
VPS50-206ENST00000443443 ELP3Q9H9T3 547 aa8.93□□□□□ -0.98
VPS50-206ENST00000443443 ABI2Q9NYB9 513 aaPredicted RBP8.93□□□□□ -0.98
VPS50-206ENST00000443443 ALKBH2Q6NS38 261 aa8.92□□□□□ -0.98
VPS50-206ENST00000443443 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
VPS50-206ENST00000443443 SHISA2Q6UWI4 295 aa8.92□□□□□ -0.98
VPS50-206ENST00000443443 FMR1NBQ8N0W7 255 aaPredicted RBP8.92□□□□□ -0.98
VPS50-206ENST00000443443 IL22RA1Q8N6P7 574 aa8.92□□□□□ -0.98
VPS50-206ENST00000443443 ANO2Q9NQ90 1003 aa8.92□□□□□ -0.98
VPS50-206ENST00000443443 USP21Q9UK80 565 aa8.92□□□□□ -0.98
VPS50-206ENST00000443443 SELPP16109 830 aa8.91□□□□□ -0.98
VPS50-206ENST00000443443 PDE12Q6L8Q7 609 aaKnown RBP8.91□□□□□ -0.98
VPS50-206ENST00000443443 NCAPG2Q86XI2 1143 aa8.91□□□□□ -0.98
VPS50-206ENST00000443443 TIMELESSQ9UNS1 1208 aa8.91□□□□□ -0.98
VPS50-206ENST00000443443 CYP2E1P05181 493 aaPredicted RBP8.9□□□□□ -0.98
VPS50-206ENST00000443443 COL13A1Q5TAT6 717 aaPredicted RBP8.9□□□□□ -0.98
VPS50-206ENST00000443443 GGNBP2Q9H3C7 697 aa8.9□□□□□ -0.98
VPS50-206ENST00000443443 TMEM63CQ9P1W3 806 aa8.9□□□□□ -0.98
VPS50-206ENST00000443443 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
VPS50-206ENST00000443443 A6NHS1 94 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 FAM13AO94988 1023 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 PDGFAP04085 211 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 HOXD8P13378 290 aaPredicted RBP8.89□□□□□ -0.99
VPS50-206ENST00000443443 MZF1P28698 734 aaPredicted RBP8.89□□□□□ -0.99
VPS50-206ENST00000443443 NRG1Q02297 640 aaPredicted RBP8.89□□□□□ -0.99
VPS50-206ENST00000443443 FKBP4Q02790 459 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS50-206ENST00000443443 CEP135Q66GS9 1140 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 B4GALNT3Q6L9W6 998 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 FBXO11Q86XK2 927 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 DTWD1Q8N5C7 304 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 LENG1Q96BZ8 264 aaPredicted RBP8.89□□□□□ -0.99
VPS50-206ENST00000443443 TRIM33Q9UPN9 1127 aa8.89□□□□□ -0.99
VPS50-206ENST00000443443 LACRTQ9GZZ8 138 aa8.88□□□□□ -0.99
VPS50-206ENST00000443443 CNTN3Q9P232 1028 aa8.88□□□□□ -0.99
VPS50-206ENST00000443443 POLIQ9UNA4 740 aa8.88□□□□□ -0.99
VPS50-206ENST00000443443 SMNDC1O75940 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS50-206ENST00000443443 CES1P23141 567 aa8.87□□□□□ -0.99
VPS50-206ENST00000443443 ATP11AP98196 1134 aa8.87□□□□□ -0.99
VPS50-206ENST00000443443 ZNF211Q13398 564 aaPredicted RBP8.87□□□□□ -0.99
VPS50-206ENST00000443443 SF3B2Q13435 895 aaKnown RBP8.87□□□□□ -0.99
VPS50-206ENST00000443443 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
VPS50-206ENST00000443443 SEMA6BQ9H3T3 888 aa8.87□□□□□ -0.99
VPS50-206ENST00000443443 KANSL3Q9P2N6 904 aa8.87□□□□□ -0.99
VPS50-206ENST00000443443 CDC25BP30305 580 aa8.86□□□□□ -0.99
VPS50-206ENST00000443443 MBTPS1Q14703 1052 aa8.86□□□□□ -0.99
VPS50-206ENST00000443443 RASSF4Q9H2L5 321 aa8.86□□□□□ -0.99
VPS50-206ENST00000443443 FAM177BA6PVY3 158 aa8.85□□□□□ -0.99
VPS50-206ENST00000443443 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
VPS50-206ENST00000443443 XKR5Q6UX68 686 aa8.85□□□□□ -0.99
VPS50-206ENST00000443443 C1orf127Q8N9H9 656 aa8.85□□□□□ -0.99
VPS50-206ENST00000443443 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
VPS50-206ENST00000443443 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
VPS50-206ENST00000443443 DEAF1O75398 565 aaPredicted RBP8.84□□□□□ -0.99
VPS50-206ENST00000443443 IGF2-ASQ6U949 168 aa8.84□□□□□ -0.99
VPS50-206ENST00000443443 TXNRD3Q86VQ6 643 aa8.84□□□□□ -0.99
VPS50-206ENST00000443443 CACTIN-AS1Q8N1I8 211 aa8.84□□□□□ -0.99
VPS50-206ENST00000443443 CEP120Q8N960 986 aa8.84□□□□□ -0.99
VPS50-206ENST00000443443 PBX4Q9BYU1 374 aa8.84□□□□□ -0.99
VPS50-206ENST00000443443 MUC3BQ9H195 1237 aa8.84□□□□□ -0.99
VPS50-206ENST00000443443 LINC01387J3KSC0 135 aa8.83□□□□□ -1
VPS50-206ENST00000443443 KIF4AO95239 1232 aa8.83□□□□□ -1
VPS50-206ENST00000443443 NPR3P17342 541 aa8.83□□□□□ -1
VPS50-206ENST00000443443 CDC27P30260 824 aa8.83□□□□□ -1
VPS50-206ENST00000443443 USP5P45974 858 aa8.83□□□□□ -1
VPS50-206ENST00000443443 PDE4CQ08493 712 aa8.83□□□□□ -1
VPS50-206ENST00000443443 RETREG2Q8NC44 543 aa8.83□□□□□ -1
VPS50-206ENST00000443443 PMEPA1Q969W9 287 aa8.83□□□□□ -1
VPS50-206ENST00000443443 CCDC87Q9NVE4 849 aa8.83□□□□□ -1
VPS50-206ENST00000443443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.83□□□□□ -1
VPS50-206ENST00000443443 ITGB7P26010 798 aa8.82□□□□□ -1
VPS50-206ENST00000443443 IREB2P48200 963 aaKnown RBP8.82□□□□□ -1
VPS50-206ENST00000443443 SERPINB4P48594 390 aa8.82□□□□□ -1
VPS50-206ENST00000443443 FZD6O60353 706 aa8.81□□□□□ -1
VPS50-206ENST00000443443 PHACTR2O75167 634 aa8.81□□□□□ -1
VPS50-206ENST00000443443 EHHADHQ08426 723 aa8.81□□□□□ -1
VPS50-206ENST00000443443 SETDB1Q15047 1291 aa8.81□□□□□ -1
VPS50-206ENST00000443443 TXNDC11Q6PKC3 985 aa8.81□□□□□ -1
VPS50-206ENST00000443443 GLYCTKQ8IVS8 523 aa8.81□□□□□ -1
VPS50-206ENST00000443443 WFDC12Q8WWY7 111 aa8.81□□□□□ -1
VPS50-206ENST00000443443 SH2B1Q9NRF2 756 aaPredicted RBP8.81□□□□□ -1
VPS50-206ENST00000443443 SALL4Q9UJQ4 1053 aa8.81□□□□□ -1
VPS50-206ENST00000443443 H3BRB1 525 aa8.8□□□□□ -1
VPS50-206ENST00000443443 DLL1O00548 723 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms