RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CCDC96Q2M329 555 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 LRRC23Q53EV4 343 aaPredicted RBP11.73□□□□□ -0.53
LIN54-202ENST00000442461 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 ARMC2Q8NEN0 867 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 SMIM24O75264 130 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 GBP1P32455 592 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 FANCCQ00597 558 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 ZNF365Q70YC5 407 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 CACTINQ8WUQ7 758 aaKnown RBP11.73□□□□□ -0.53
LIN54-202ENST00000442461 IFT81Q8WYA0 676 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 TRIM7Q9C029 511 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 SELENOSQ9BQE4 189 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 TRIM4Q9C037 500 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 IRX1P78414 480 aaPredicted RBP11.72□□□□□ -0.53
LIN54-202ENST00000442461 E2F5Q15329 346 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 SND1Q7KZF4 910 aaKnown RBP eCLIP11.72□□□□□ -0.53
LIN54-202ENST00000442461 CEP120Q8N960 986 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 THUMPD2Q9BTF0 503 aaKnown RBP11.72□□□□□ -0.53
LIN54-202ENST00000442461 IRAK4Q9NWZ3 460 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 TRIM66O15016 1216 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 SLFN14P0C7P3 912 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 TCHPQ9BT92 498 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 E7EVH7 732 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 SETDB1Q15047 1291 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 PPP1R7Q15435 360 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 NGDNQ8NEJ9 315 aaKnown RBP11.72□□□□□ -0.53
LIN54-202ENST00000442461 ANKRD7Q92527 254 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 NRBP1Q9UHY1 535 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 FAM184BQ9ULE4 1060 aa11.72□□□□□ -0.53
LIN54-202ENST00000442461 TRIM21P19474 475 aaKnown RBP11.71□□□□□ -0.53
LIN54-202ENST00000442461 VPS36Q86VN1 386 aa11.71□□□□□ -0.53
LIN54-202ENST00000442461 SH3GL3Q99963 347 aa11.71□□□□□ -0.53
LIN54-202ENST00000442461 CEP128Q6ZU80 1094 aa11.71□□□□□ -0.54
LIN54-202ENST00000442461 NEK1Q96PY6 1258 aa11.71□□□□□ -0.54
LIN54-202ENST00000442461 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.54
LIN54-202ENST00000442461 VIMP08670 466 aaKnown RBP11.71□□□□□ -0.54
LIN54-202ENST00000442461 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.54
LIN54-202ENST00000442461 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.54
LIN54-202ENST00000442461 CCDC141Q6ZP82 1450 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 USP19O94966 1318 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 HIP1RO75146 1068 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
LIN54-202ENST00000442461 SLC20A2Q08357 652 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
LIN54-202ENST00000442461 GBP5Q96PP8 586 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 CETN3O15182 167 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 SPTLC2O15270 562 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 MTIF2P46199 727 aaKnown RBP11.7□□□□□ -0.54
LIN54-202ENST00000442461 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
LIN54-202ENST00000442461 EVI5LQ96CN4 794 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 RPGRIP1Q96KN7 1286 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
LIN54-202ENST00000442461 PFDN1O60925 122 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 SEPT14Q6ZU15 432 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 IQCA1Q86XH1 822 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
LIN54-202ENST00000442461 BICC1Q9H694 974 aaKnown RBP11.7□□□□□ -0.54
LIN54-202ENST00000442461 ECHDC1Q9NTX5 307 aa11.7□□□□□ -0.54
LIN54-202ENST00000442461 GOLGA8KD6RF30 607 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 ZC3H6P61129 1189 aaKnown RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 WWC2Q6AWC2 1192 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 PSMD1Q99460 953 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 INSRP06213 1382 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 TLDC2A0PJX2 215 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 MAP7Q14244 749 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 PRM3Q9NNZ6 103 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 TTC41PQ6P2S7 1318 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 TDRD7Q8NHU6 1098 aaKnown RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 LEO1Q8WVC0 666 aaPredicted RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 CHAMP1Q96JM3 812 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 TBC1D2BQ9UPU7 963 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 FGFR1OPO95684 399 aaKnown RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 NOP2P46087 812 aaKnown RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 MUM1L1Q5H9M0 696 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 CCDC170Q8IYT3 715 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 RNF10Q8N5U6 811 aaKnown RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 STMN2Q93045 179 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
LIN54-202ENST00000442461 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.69□□□□□ -0.54
LIN54-202ENST00000442461 PTPRCP08575 1304 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 RNF40O75150 1001 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms