RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CDC5LQ99459 802 aaKnown RBP15.09■□□□□ 0.01
TTC28-203ENST00000442232 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 POLLQ9UGP5 575 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 WDR33Q9C0J8 1336 aaKnown RBP15.09■□□□□ 0.01
TTC28-203ENST00000442232 COL4A1P02462 1669 aa15.09■□□□□ 0.01
TTC28-203ENST00000442232 FOXN1O15353 648 aa15.08■□□□□ 0
TTC28-203ENST00000442232 CTCFP49711 727 aaPredicted RBP15.08■□□□□ 0
TTC28-203ENST00000442232 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
TTC28-203ENST00000442232 GRM1Q13255 1194 aa15.08■□□□□ 0
TTC28-203ENST00000442232 DOK7Q18PE1 504 aa15.08■□□□□ 0
TTC28-203ENST00000442232 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
TTC28-203ENST00000442232 DPF2Q92785 391 aa15.08■□□□□ 0
TTC28-203ENST00000442232 PODXL2Q9NZ53 605 aa15.08■□□□□ 0
TTC28-203ENST00000442232 CAPN15O75808 1086 aa15.07■□□□□ 0
TTC28-203ENST00000442232 CELF2O95319 508 aaKnown RBP15.07■□□□□ 0
TTC28-203ENST00000442232 SLC4A2P04920 1241 aa15.07■□□□□ 0
TTC28-203ENST00000442232 CTSWP56202 376 aa15.07■□□□□ 0
TTC28-203ENST00000442232 TRPM4Q8TD43 1214 aa15.07■□□□□ 0
TTC28-203ENST00000442232 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
TTC28-203ENST00000442232 BEGAINQ9BUH8 593 aa15.07■□□□□ 0
TTC28-203ENST00000442232 GLIS2Q9BZE0 524 aaPredicted RBP15.07■□□□□ 0
TTC28-203ENST00000442232 ZNF408Q9H9D4 720 aa15.07■□□□□ 0
TTC28-203ENST00000442232 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
TTC28-203ENST00000442232 XDHP47989 1333 aa15.07■□□□□ 0
TTC28-203ENST00000442232 THSD7BQ9C0I4 1608 aa15.06■□□□□ 0
TTC28-203ENST00000442232 PSME4Q14997 1843 aa15.06■□□□□ 0
TTC28-203ENST00000442232 FMR1Q06787 632 aaKnown RBP eCLIP15.06■□□□□ 0
TTC28-203ENST00000442232 CDC37L1Q7L3B6 337 aa15.06■□□□□ 0
TTC28-203ENST00000442232 CAPNS2Q96L46 248 aa15.06■□□□□ 0
TTC28-203ENST00000442232 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
TTC28-203ENST00000442232 TLL2Q9Y6L7 1015 aa15.06■□□□□ 0
TTC28-203ENST00000442232 IGKV5-2P06315 115 aa15.05■□□□□ -0
TTC28-203ENST00000442232 FLIIQ13045 1269 aa15.05■□□□□ -0
TTC28-203ENST00000442232 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ -0
TTC28-203ENST00000442232 MYH16Q9H6N6 1097 aa15.05■□□□□ -0
TTC28-203ENST00000442232 PRDM10Q9NQV6 1147 aa15.05■□□□□ -0
TTC28-203ENST00000442232 WBP1LQ9NX94 342 aa15.05■□□□□ -0
TTC28-203ENST00000442232 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
TTC28-203ENST00000442232 FANCIQ9NVI1 1328 aa15.05■□□□□ -0
TTC28-203ENST00000442232 SCN9AQ15858 1988 aa15.05■□□□□ -0
TTC28-203ENST00000442232 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
TTC28-203ENST00000442232 ATP2B4P23634 1241 aa15.04■□□□□ -0
TTC28-203ENST00000442232 HIRAP54198 1017 aaPredicted RBP15.04■□□□□ -0
TTC28-203ENST00000442232 CWF19L2Q2TBE0 894 aaKnown RBP15.04■□□□□ -0
TTC28-203ENST00000442232 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
TTC28-203ENST00000442232 CST9Q5W186 159 aa15.04■□□□□ -0
TTC28-203ENST00000442232 CYP4F22Q6NT55 531 aa15.04■□□□□ -0
TTC28-203ENST00000442232 UBE3BQ7Z3V4 1068 aa15.04■□□□□ -0
TTC28-203ENST00000442232 WDR63Q8IWG1 891 aa15.04■□□□□ -0
TTC28-203ENST00000442232 PGAP2Q9UHJ9 254 aa15.04■□□□□ -0
TTC28-203ENST00000442232 RTL9Q8NET4 1388 aa15.03■□□□□ -0
TTC28-203ENST00000442232 SHTN1A0MZ66 631 aa15.03■□□□□ -0
TTC28-203ENST00000442232 IGHMBP2P38935 993 aaKnown RBP15.03■□□□□ -0
TTC28-203ENST00000442232 RBM26Q5T8P6 1007 aaKnown RBP15.03■□□□□ -0
TTC28-203ENST00000442232 SAMD7Q7Z3H4 446 aa15.03■□□□□ -0
TTC28-203ENST00000442232 DCPSQ96C86 337 aaKnown RBP15.03■□□□□ -0
TTC28-203ENST00000442232 POLR2AP24928 1970 aaKnown RBP15.03■□□□□ -0
TTC28-203ENST00000442232 VIL1P09327 827 aaKnown RBP15.02■□□□□ -0
TTC28-203ENST00000442232 KIF4BQ2VIQ3 1234 aa15.02■□□□□ -0
TTC28-203ENST00000442232 G2E3Q7L622 706 aa15.02■□□□□ -0
TTC28-203ENST00000442232 KRT26Q7Z3Y9 468 aa15.02■□□□□ -0
TTC28-203ENST00000442232 USP48Q86UV5 1035 aa15.02■□□□□ -0
TTC28-203ENST00000442232 TTLL11Q8NHH1 800 aa15.02■□□□□ -0
TTC28-203ENST00000442232 DNAAF4Q8WXU2 420 aa15.02■□□□□ -0
TTC28-203ENST00000442232 GREM2Q9H772 168 aa15.02■□□□□ -0
TTC28-203ENST00000442232 LBX1P52954 281 aa15.01□□□□□ -0.01
TTC28-203ENST00000442232 SAPCD2Q86UD0 394 aa15.01□□□□□ -0.01
TTC28-203ENST00000442232 AGBL3Q8NEM8 1001 aa15.01□□□□□ -0.01
TTC28-203ENST00000442232 HHIPL1Q96JK4 782 aa15.01□□□□□ -0.01
TTC28-203ENST00000442232 KCNQ5Q9NR82 932 aa15.01□□□□□ -0.01
TTC28-203ENST00000442232 BSDC1Q9NW68 430 aaPredicted RBP15.01□□□□□ -0.01
TTC28-203ENST00000442232 MED23Q9ULK4 1368 aa15□□□□□ -0.01
TTC28-203ENST00000442232 MAP2K2P36507 400 aa15□□□□□ -0.01
TTC28-203ENST00000442232 GCKRQ14397 625 aa15□□□□□ -0.01
TTC28-203ENST00000442232 RSBN1LQ6PCB5 846 aaPredicted RBP15□□□□□ -0.01
TTC28-203ENST00000442232 PODNQ7Z5L7 613 aa15□□□□□ -0.01
TTC28-203ENST00000442232 SULF1Q8IWU6 871 aa15□□□□□ -0.01
TTC28-203ENST00000442232 FAM9BQ8IZU0 186 aa15□□□□□ -0.01
TTC28-203ENST00000442232 LINS1Q8NG48 757 aa15□□□□□ -0.01
TTC28-203ENST00000442232 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
TTC28-203ENST00000442232 ZNF609O15014 1411 aa15□□□□□ -0.01
TTC28-203ENST00000442232 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 H7C1W4 665 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 HSPA8P11142 646 aaKnown RBP14.99□□□□□ -0.01
TTC28-203ENST00000442232 CCT4P50991 539 aaKnown RBP14.99□□□□□ -0.01
TTC28-203ENST00000442232 EXOSC9Q06265 439 aaKnown RBP14.99□□□□□ -0.01
TTC28-203ENST00000442232 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 C2orf69Q8N8R5 385 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 ANKRD2Q9GZV1 360 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 GGA3Q9NZ52 723 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 MINPP1Q9UNW1 487 aa14.99□□□□□ -0.01
TTC28-203ENST00000442232 AOC2O75106 756 aa14.98□□□□□ -0.01
TTC28-203ENST00000442232 ITGA6P23229 1130 aa14.98□□□□□ -0.01
TTC28-203ENST00000442232 KCNJ4P48050 445 aa14.98□□□□□ -0.01
TTC28-203ENST00000442232 HUNKP57058 714 aa14.98□□□□□ -0.01
TTC28-203ENST00000442232 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
TTC28-203ENST00000442232 GBA2Q9HCG7 927 aaPredicted RBP14.98□□□□□ -0.01
TTC28-203ENST00000442232 LEMD3Q9Y2U8 911 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms