RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 KCNJ4P48050 445 aa15.83■□□□□ 0.12
CPSF4-206ENST00000441580 CCDC152Q4G0S7 254 aa15.83■□□□□ 0.12
CPSF4-206ENST00000441580 GORABQ5T7V8 394 aa15.83■□□□□ 0.12
CPSF4-206ENST00000441580 MAP4K1Q92918 833 aa15.83■□□□□ 0.12
CPSF4-206ENST00000441580 INTS4Q96HW7 963 aaKnown RBP15.83■□□□□ 0.12
CPSF4-206ENST00000441580 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.12
CPSF4-206ENST00000441580 RBM8AQ9Y5S9 174 aaKnown RBP15.83■□□□□ 0.12
CPSF4-206ENST00000441580 PSMA5P28066 241 aa15.82■□□□□ 0.12
CPSF4-206ENST00000441580 CUL4AQ13619 759 aa15.82■□□□□ 0.12
CPSF4-206ENST00000441580 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
CPSF4-206ENST00000441580 LDHAL6AQ6ZMR3 332 aa15.82■□□□□ 0.12
CPSF4-206ENST00000441580 TMX3Q96JJ7 454 aa15.82■□□□□ 0.12
CPSF4-206ENST00000441580 ZNF512BQ96KM6 892 aaPredicted RBP15.82■□□□□ 0.12
CPSF4-206ENST00000441580 HELLSQ9NRZ9 838 aa15.82■□□□□ 0.12
CPSF4-206ENST00000441580 RIPOR2Q9Y4F9 1068 aa15.82■□□□□ 0.12
CPSF4-206ENST00000441580 GOLIM4O00461 696 aa15.81■□□□□ 0.12
CPSF4-206ENST00000441580 ONECUT3O60422 494 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 ZFYP08048 801 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 MCM4P33991 863 aa15.81■□□□□ 0.12
CPSF4-206ENST00000441580 PTH1RQ03431 593 aa15.81■□□□□ 0.12
CPSF4-206ENST00000441580 KRT32Q14532 448 aa15.81■□□□□ 0.12
CPSF4-206ENST00000441580 PUM3Q15397 648 aaKnown RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 MCMDC2Q4G0Z9 681 aa15.81■□□□□ 0.12
CPSF4-206ENST00000441580 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 DDX46Q7L014 1031 aaKnown RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
CPSF4-206ENST00000441580 XAGE2Q96GT9 111 aa15.81■□□□□ 0.12
CPSF4-206ENST00000441580 CCDC85AQ96PX6 553 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 U3KPZ7 1027 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-206ENST00000441580 NECTIN1Q15223 517 aa15.8■□□□□ 0.12
CPSF4-206ENST00000441580 CREB3L3Q68CJ9 461 aa15.8■□□□□ 0.12
CPSF4-206ENST00000441580 TTC14Q96N46 770 aa15.8■□□□□ 0.12
CPSF4-206ENST00000441580 CCNL1Q9UK58 526 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-206ENST00000441580 RPS6KA4O75676 772 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
CPSF4-206ENST00000441580 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
CPSF4-206ENST00000441580 TIMM10P62072 90 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 VPS53Q5VIR6 699 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 USPL1Q5W0Q7 1092 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 TNPO1Q92973 898 aaKnown RBP15.79■□□□□ 0.12
CPSF4-206ENST00000441580 EDC3Q96F86 508 aaKnown RBP15.79■□□□□ 0.12
CPSF4-206ENST00000441580 JAKMIP1Q96N16 626 aaKnown RBP15.79■□□□□ 0.12
CPSF4-206ENST00000441580 NYXQ9GZU5 481 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 FOXD4L1Q9NU39 408 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 DOCK2Q92608 1830 aa15.79■□□□□ 0.12
CPSF4-206ENST00000441580 GOLGA6L22H0YM25 854 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 SLC27A2O14975 620 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 TAF5LO75529 589 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 PDE8BO95263 885 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 UQCRFS1P1P0C7P4 283 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 SLC5A1P13866 664 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 SSFA2P28290 1259 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 ZMYM1Q5SVZ6 1142 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 CLEC17AQ6ZS10 378 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 ZNF589Q86UQ0 364 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-206ENST00000441580 RASEFQ8IZ41 740 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 LPIN2Q92539 896 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 CDC5LQ99459 802 aaKnown RBP15.78■□□□□ 0.12
CPSF4-206ENST00000441580 MPHOSPH8Q99549 860 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 DSCC1Q9BVC3 393 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 SH2B1Q9NRF2 756 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-206ENST00000441580 NARFQ9UHQ1 456 aa15.78■□□□□ 0.12
CPSF4-206ENST00000441580 AKAP11Q9UKA4 1901 aa15.77■□□□□ 0.12
CPSF4-206ENST00000441580 RNF113AO15541 343 aaKnown RBP15.77■□□□□ 0.12
CPSF4-206ENST00000441580 HMGB2P26583 209 aaKnown RBP15.77■□□□□ 0.12
CPSF4-206ENST00000441580 ADORA1P30542 326 aa15.77■□□□□ 0.12
CPSF4-206ENST00000441580 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.12
CPSF4-206ENST00000441580 TSGA10IPQ3SY00 556 aa15.77■□□□□ 0.12
CPSF4-206ENST00000441580 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.77■□□□□ 0.12
CPSF4-206ENST00000441580 GNPATO15228 680 aa15.76■□□□□ 0.11
CPSF4-206ENST00000441580 CYP2E1P05181 493 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-206ENST00000441580 HCLS1P14317 486 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-206ENST00000441580 ARID4AP29374 1257 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-206ENST00000441580 ANKRD1Q15327 319 aa15.76■□□□□ 0.11
CPSF4-206ENST00000441580 ZSCAN25Q6NSZ9 544 aa15.76■□□□□ 0.11
CPSF4-206ENST00000441580 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
CPSF4-206ENST00000441580 SEPT12Q8IYM1 358 aa15.76■□□□□ 0.11
CPSF4-206ENST00000441580 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-206ENST00000441580 PDRG1Q9NUG6 133 aa15.76■□□□□ 0.11
CPSF4-206ENST00000441580 LIMCH1Q9UPQ0 1083 aa15.76■□□□□ 0.11
CPSF4-206ENST00000441580 RTCBQ9Y3I0 505 aaKnown RBP15.76■□□□□ 0.11
CPSF4-206ENST00000441580 MAST3O60307 1309 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 ADRA2BP18089 450 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 FGFR2P21802 821 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 AK2P54819 239 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 BLOC1S2Q6QNY1 142 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
CPSF4-206ENST00000441580 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 UBR3Q6ZT12 1888 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
CPSF4-206ENST00000441580 LAMA4Q16363 1823 aa15.74■□□□□ 0.11
CPSF4-206ENST00000441580 ZPR1O75312 459 aa15.74■□□□□ 0.11
CPSF4-206ENST00000441580 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
CPSF4-206ENST00000441580 ZGPATQ8N5A5 531 aaKnown RBP15.74■□□□□ 0.11
CPSF4-206ENST00000441580 APPBP2Q92624 585 aa15.74■□□□□ 0.11
CPSF4-206ENST00000441580 ALDH8A1Q9H2A2 487 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms