RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 TPCN1Q9ULQ1 816 aa9.77□□□□□ -0.84
SPIRE1-204ENST00000440472 ZNF831Q5JPB2 1677 aa9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 LRP5O75197 1615 aa9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 MYH3P11055 1940 aa9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 IL6STP40189 918 aaPredicted RBP9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 USP48Q86UV5 1035 aa9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 ANP32BQ92688 251 aaKnown RBP9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 PDLIM2Q96JY6 352 aa9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 NEK1Q96PY6 1258 aa9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 LLPHQ9BRT6 129 aaKnown RBP9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 ASAP1Q9ULH1 1129 aa9.77□□□□□ -0.85
SPIRE1-204ENST00000440472 ELP1O95163 1332 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 A0A1B0GUL7 405 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 EXOC5O00471 708 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 RNF113AO15541 343 aaKnown RBP9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 NOL8Q76FK4 1167 aaKnown RBP9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 CCDC83Q8IWF9 413 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 RGS17Q9UGC6 210 aaPredicted RBP9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 RGL2O15211 777 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 IFIT1P09914 478 aaKnown RBP9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 CLCN1P35523 988 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 UVSSAQ2YD98 709 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 LRRC24Q50LG9 513 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 CCDC158Q5M9N0 1113 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 NLRP10Q86W26 655 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 FAM184AQ8NB25 1140 aa9.76□□□□□ -0.85
SPIRE1-204ENST00000440472 NUP98P52948 1817 aa9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 TCHHQ07283 1943 aa9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 NWD2Q9ULI1 1742 aa9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 CPA1P15085 419 aa9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 IFIT5Q13325 482 aaKnown RBP9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 EDC3Q96F86 508 aaKnown RBP9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 DNAJC2Q99543 621 aaKnown RBP9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 RIPOR2Q9Y4F9 1068 aa9.75□□□□□ -0.85
SPIRE1-204ENST00000440472 CYP21A2P08686 494 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 PRIM1P49642 420 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 EVCP57679 992 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 TIMM10P62072 90 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 EXOSC10Q01780 885 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 CCDC183Q5T5S1 534 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 DHX32Q7L7V1 743 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 ZNF34Q8IZ26 560 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 GTF3C6Q969F1 213 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 CTNNA3Q9UI47 895 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 RIC1Q4ADV7 1423 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 ARAP2Q8WZ64 1704 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 RTL9Q8NET4 1388 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 WDR19Q8NEZ3 1342 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 ATRNO75882 1429 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 PFKFB2O60825 505 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 DDX46Q7L014 1031 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 TTLL11Q8NHH1 800 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 SMARCC2Q8TAQ2 1214 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 NEUROD6Q96NK8 337 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 SLC4A9Q96Q91 983 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 RBSNQ9H1K0 784 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 NSFL1CQ9UNZ2 370 aaKnown RBP9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 LAMA4Q16363 1823 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 MYH7P12883 1935 aa9.74□□□□□ -0.85
SPIRE1-204ENST00000440472 GOLIM4O00461 696 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 PDE8AO60658 829 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 HSP90B1P14625 803 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 CTSWP56202 376 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 LARP1BQ659C4 914 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 XAGE2Q96GT9 111 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 PUS3Q9BZE2 481 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 TSPY26PQ9H489 355 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 RBM27Q9P2N5 1060 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 DOT1LQ8TEK3 1739 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 MAST3O60307 1309 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 SPATA31A1Q5TZJ5 1347 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 ANKRD18BA2A2Z9 1011 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 HSPD1P10809 573 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 EIF5P55010 431 aaKnown RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 ATL3Q6DD88 541 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 ZSCAN25Q6NSZ9 544 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 VGLL2Q8N8G2 317 aa9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 ZNF274Q96GC6 653 aaPredicted RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 ZNF594Q96JF6 807 aaPredicted RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 RRAGDQ9NQL2 400 aaPredicted RBP9.73□□□□□ -0.85
SPIRE1-204ENST00000440472 AKAP11Q9UKA4 1901 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 LAMB2P55268 1798 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 ESPNB1AK53 854 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 GADD45BO75293 160 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 KRT85P78386 507 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 HMGN5P82970 282 aaKnown RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 TTF1Q15361 905 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 TTC39AQ5SRH9 613 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 FOXD4L5Q5VV16 416 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 BARGINQ6ZT62 677 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 APPBP2Q92624 585 aa9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 TRIM44Q96DX7 344 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 SCAND2PQ9GZW5 306 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 ZSCAN16Q9H4T2 348 aaPredicted RBP9.72□□□□□ -0.85
SPIRE1-204ENST00000440472 PCDH10Q9P2E7 1040 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms