RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FAM229AH3BQW9 127 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 TNFRSF10BO14763 440 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 MMP20O60882 483 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 SMNDC1O75940 238 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 SCNN1AP37088 669 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 MLLT1Q03111 559 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 TXNRD3Q86VQ6 643 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 DMRTC2Q8IXT2 367 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 USTQ9Y2C2 406 aa5.85□□□□□ -1.47
HMGB3P11-201ENST00000440127 USP5P45974 858 aa5.84□□□□□ -1.47
HMGB3P11-201ENST00000440127 FAM117BQ6P1L5 589 aa5.84□□□□□ -1.47
HMGB3P11-201ENST00000440127 FBXO11Q86XK2 927 aa5.84□□□□□ -1.47
HMGB3P11-201ENST00000440127 OR13H1Q8NG92 308 aa5.84□□□□□ -1.47
HMGB3P11-201ENST00000440127 GPR152Q8TDT2 470 aa5.84□□□□□ -1.47
HMGB3P11-201ENST00000440127 NSUN5Q96P11 429 aaKnown RBP5.84□□□□□ -1.47
HMGB3P11-201ENST00000440127 ABI2Q9NYB9 513 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P11-201ENST00000440127 EHHADHQ08426 723 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 ADGRE1Q14246 886 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 MBTPS1Q14703 1052 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 TRIP4Q15650 581 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 GRIK4Q16099 956 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 NOM1Q5C9Z4 860 aaKnown RBP5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 IGF2-ASQ6U949 168 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 ZNF438Q7Z4V0 828 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 PMEPA1Q969W9 287 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 USP20Q9Y2K6 914 aa5.83□□□□□ -1.48
HMGB3P11-201ENST00000440127 ZBTB42B2RXF5 422 aa5.82□□□□□ -1.48
HMGB3P11-201ENST00000440127 FAM13AO94988 1023 aa5.82□□□□□ -1.48
HMGB3P11-201ENST00000440127 DOC2BQ14184 412 aa5.82□□□□□ -1.48
HMGB3P11-201ENST00000440127 HFE2Q6ZVN8 426 aa5.82□□□□□ -1.48
HMGB3P11-201ENST00000440127 H2AFB1P0C5Y9 115 aa5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 H2AFB2P0C5Z0 115 aa5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 MZF1P28698 734 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 AAMPQ13685 434 aa5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 GDF6Q6KF10 455 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 NCAPG2Q86XI2 1143 aa5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 IL22RA1Q8N6P7 574 aa5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 NUDT16Q96DE0 195 aaKnown RBP5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 MRPL18Q9H0U6 180 aaKnown RBP5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 SEMA6BQ9H3T3 888 aa5.81□□□□□ -1.48
HMGB3P11-201ENST00000440127 EIF4EBP3O60516 100 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 SELPP16109 830 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 PTPRAP18433 802 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 SSFA2P28290 1259 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 CABP4P57796 275 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 GRIK5Q16478 980 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 GTF3C2Q8WUA4 911 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 ELP3Q9H9T3 547 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 TPSG1Q9NRR2 321 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 SEPT3Q9UH03 358 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 PPME1Q9Y570 386 aa5.8□□□□□ -1.48
HMGB3P11-201ENST00000440127 DCAF1Q9Y4B6 1507 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 TMEM88BA6NKF7 163 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 J3QW42 95 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 KIF4AO95239 1232 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 CDC27P30260 824 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 DNM1Q05193 864 aaKnown RBP5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 XKR5Q6UX68 686 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 CAPN12Q6ZSI9 719 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 EDEM1Q92611 657 aa5.79□□□□□ -1.48
HMGB3P11-201ENST00000440127 CES1P23141 567 aa5.78□□□□□ -1.48
HMGB3P11-201ENST00000440127 EIF1AXP47813 144 aaKnown RBP5.78□□□□□ -1.48
HMGB3P11-201ENST00000440127 RSPO4Q2I0M5 234 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P11-201ENST00000440127 C8orf34Q49A92 452 aa5.78□□□□□ -1.48
HMGB3P11-201ENST00000440127 CEP135Q66GS9 1140 aa5.78□□□□□ -1.48
HMGB3P11-201ENST00000440127 SNX29Q8TEQ0 813 aa5.78□□□□□ -1.48
HMGB3P11-201ENST00000440127 EGFL7Q9UHF1 273 aa5.78□□□□□ -1.48
HMGB3P11-201ENST00000440127 DLL1O00548 723 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 DYRK3O43781 588 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 PDGFAP04085 211 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 NEFLP07196 543 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 EDN3P14138 238 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 MPSTP25325 297 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 ZMYM1Q5SVZ6 1142 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 SHISA2Q6UWI4 295 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 ILDR2Q71H61 639 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 KLHL23Q8NBE8 558 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 WFDC12Q8WWY7 111 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 WNT8BQ93098 351 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 TP53INP1Q96A56 240 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 PBX4Q9BYU1 374 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 CEP41Q9BYV8 373 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 AKTIPQ9H8T0 292 aa5.77□□□□□ -1.49
HMGB3P11-201ENST00000440127 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 ZBTB39O15060 712 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 NPR3P17342 541 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 ARL4DP49703 201 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 FKBP4Q02790 459 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 NKAPLQ5M9Q1 402 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 SLC51AQ86UW1 340 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 TMEM130Q8N3G9 435 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 SLAIN2Q9P270 581 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 TRIM33Q9UPN9 1127 aa5.76□□□□□ -1.49
HMGB3P11-201ENST00000440127 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
HMGB3P11-201ENST00000440127 PHACTR2O75167 634 aa5.75□□□□□ -1.49
HMGB3P11-201ENST00000440127 ABL1P00519 1130 aa5.75□□□□□ -1.49
HMGB3P11-201ENST00000440127 IREB2P48200 963 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms