RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 CCDC158Q5M9N0 1113 aa18■□□□□ 0.47
IFT140-204ENST00000439987 VGLL2Q8N8G2 317 aa18■□□□□ 0.47
IFT140-204ENST00000439987 RTL9Q8NET4 1388 aa18■□□□□ 0.47
IFT140-204ENST00000439987 BRWD3Q6RI45 1802 aa18■□□□□ 0.47
IFT140-204ENST00000439987 C4BP0C0L5 1744 aa18■□□□□ 0.47
IFT140-204ENST00000439987 ZPR1O75312 459 aa18■□□□□ 0.47
IFT140-204ENST00000439987 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
IFT140-204ENST00000439987 PTH1RQ03431 593 aa18■□□□□ 0.47
IFT140-204ENST00000439987 GORABQ5T7V8 394 aa18■□□□□ 0.47
IFT140-204ENST00000439987 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
IFT140-204ENST00000439987 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
IFT140-204ENST00000439987 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
IFT140-204ENST00000439987 PAG1Q9NWQ8 432 aa18■□□□□ 0.47
IFT140-204ENST00000439987 CCDC171Q6TFL3 1326 aa18■□□□□ 0.47
IFT140-204ENST00000439987 NEK4P51957 841 aa17.99■□□□□ 0.47
IFT140-204ENST00000439987 AMIGO3Q86WK7 504 aa17.99■□□□□ 0.47
IFT140-204ENST00000439987 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
IFT140-204ENST00000439987 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
IFT140-204ENST00000439987 MED23Q9ULK4 1368 aa17.99■□□□□ 0.47
IFT140-204ENST00000439987 PDE8BO95263 885 aa17.99■□□□□ 0.47
IFT140-204ENST00000439987 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
IFT140-204ENST00000439987 GOLIM4O00461 696 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 HSP90AA1P07900 732 aaKnown RBP17.98■□□□□ 0.47
IFT140-204ENST00000439987 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 TICAM2Q86XR7 235 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
IFT140-204ENST00000439987 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 ERFEQ4G0M1 354 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 TTC39AQ5SRH9 613 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 ABCC12Q96J65 1359 aa17.98■□□□□ 0.47
IFT140-204ENST00000439987 DDIT3P35638 169 aa17.97■□□□□ 0.47
IFT140-204ENST00000439987 MPHOSPH8Q99549 860 aa17.97■□□□□ 0.47
IFT140-204ENST00000439987 CHMP5Q9NZZ3 219 aa17.97■□□□□ 0.47
IFT140-204ENST00000439987 SNX14Q9Y5W7 946 aa17.97■□□□□ 0.47
IFT140-204ENST00000439987 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
IFT140-204ENST00000439987 ZNF772Q68DY9 489 aaPredicted RBP17.96■□□□□ 0.47
IFT140-204ENST00000439987 RASEFQ8IZ41 740 aa17.96■□□□□ 0.47
IFT140-204ENST00000439987 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
IFT140-204ENST00000439987 ZNF589Q86UQ0 364 aaPredicted RBP17.96■□□□□ 0.47
IFT140-204ENST00000439987 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
IFT140-204ENST00000439987 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
IFT140-204ENST00000439987 TRAPPC3LQ5T215 181 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 NYXQ9GZU5 481 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 COL24A1Q17RW2 1714 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 TRIM37O94972 964 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 GTF2E1P29083 439 aaPredicted RBP17.95■□□□□ 0.46
IFT140-204ENST00000439987 RFC4P35249 363 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 MCM2P49736 904 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 PUM3Q15397 648 aaKnown RBP17.95■□□□□ 0.46
IFT140-204ENST00000439987 SLC10A5Q5PT55 438 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
IFT140-204ENST00000439987 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
IFT140-204ENST00000439987 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
IFT140-204ENST00000439987 KCNB2Q92953 911 aa17.94■□□□□ 0.46
IFT140-204ENST00000439987 UPF3BQ9BZI7 483 aaKnown RBP17.94■□□□□ 0.46
IFT140-204ENST00000439987 RBM8AQ9Y5S9 174 aaKnown RBP17.94■□□□□ 0.46
IFT140-204ENST00000439987 PHF14O94880 888 aa17.94■□□□□ 0.46
IFT140-204ENST00000439987 CHGBP05060 677 aa17.94■□□□□ 0.46
IFT140-204ENST00000439987 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
IFT140-204ENST00000439987 PRPF40BQ6NWY9 871 aaKnown RBP17.94■□□□□ 0.46
IFT140-204ENST00000439987 HELBQ8NG08 1087 aaPredicted RBP17.94■□□□□ 0.46
IFT140-204ENST00000439987 LPIN2Q92539 896 aa17.94■□□□□ 0.46
IFT140-204ENST00000439987 ZNF512BQ96KM6 892 aaPredicted RBP17.94■□□□□ 0.46
IFT140-204ENST00000439987 TAF5LO75529 589 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 FGFR2P21802 821 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 SCARF1Q14162 830 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 C3orf67Q6ZVT6 689 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
IFT140-204ENST00000439987 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
IFT140-204ENST00000439987 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
IFT140-204ENST00000439987 ADRA2BP18089 450 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 KCNJ4P48050 445 aa17.93■□□□□ 0.46
IFT140-204ENST00000439987 SEC62Q99442 399 aaKnown RBP17.92■□□□□ 0.46
IFT140-204ENST00000439987 HELLSQ9NRZ9 838 aa17.92■□□□□ 0.46
IFT140-204ENST00000439987 ARAP2Q8WZ64 1704 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 ZKSCAN1P17029 563 aaPredicted RBP17.91■□□□□ 0.46
IFT140-204ENST00000439987 CREB3L3Q68CJ9 461 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 TPTE2Q6XPS3 522 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 FRAT2O75474 233 aaPredicted RBP17.91■□□□□ 0.46
IFT140-204ENST00000439987 SLC5A1P13866 664 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 MCAMP43121 646 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 ZAP70P43403 619 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 ZMYM1Q5SVZ6 1142 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
IFT140-204ENST00000439987 RNF113AO15541 343 aaKnown RBP17.9■□□□□ 0.46
IFT140-204ENST00000439987 SSFA2P28290 1259 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 LRRFIP1Q32MZ4 808 aaKnown RBP17.9■□□□□ 0.46
IFT140-204ENST00000439987 CCDC102BQ68D86 513 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 CCDC129Q6ZRS4 1044 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 AKAP11Q9UKA4 1901 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
IFT140-204ENST00000439987 RNF20Q5VTR2 975 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 PI16Q6UXB8 463 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms