RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TMC4Q7Z404 712 aa25.5■■□□□ 1.67
CHD3-204ENST00000439235 IL1RAPL2Q9NP60 686 aa25.5■■□□□ 1.67
CHD3-204ENST00000439235 KIF13BQ9NQT8 1826 aa25.49■■□□□ 1.67
CHD3-204ENST00000439235 COL4A1P02462 1669 aa25.49■■□□□ 1.67
CHD3-204ENST00000439235 BBOX1O75936 387 aa25.49■■□□□ 1.67
CHD3-204ENST00000439235 GPR108Q9NPR9 543 aa25.49■■□□□ 1.67
CHD3-204ENST00000439235 AKAP2Q9Y2D5 859 aa25.48■■□□□ 1.67
CHD3-204ENST00000439235 SPEF2Q9C093 1822 aa25.48■■□□□ 1.67
CHD3-204ENST00000439235 ZNF622Q969S3 477 aaKnown RBP eCLIP25.47■■□□□ 1.67
CHD3-204ENST00000439235 ZNF609O15014 1411 aa25.46■■□□□ 1.67
CHD3-204ENST00000439235 TGFB2P61812 414 aa25.46■■□□□ 1.67
CHD3-204ENST00000439235 TNNI3KQ59H18 835 aa25.46■■□□□ 1.67
CHD3-204ENST00000439235 CNKSR1Q969H4 720 aa25.46■■□□□ 1.67
CHD3-204ENST00000439235 BCL11AQ9H165 835 aa25.46■■□□□ 1.67
CHD3-204ENST00000439235 FPGT-TNNI3KV9GXZ4 949 aa25.46■■□□□ 1.67
CHD3-204ENST00000439235 PPEF1O14829 653 aaPredicted RBP25.45■■□□□ 1.66
CHD3-204ENST00000439235 PDE8BO95263 885 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 IFIT2P09913 472 aaKnown RBP25.45■■□□□ 1.66
CHD3-204ENST00000439235 PDE4AP27815 886 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 CHRNA5P30532 468 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 CHRNDQ07001 517 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 AACSQ86V21 672 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 ANKRD2Q9GZV1 360 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 MINPP1Q9UNW1 487 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 CD2APQ9Y5K6 639 aa25.45■■□□□ 1.66
CHD3-204ENST00000439235 VGLL2Q8N8G2 317 aa25.44■■□□□ 1.66
CHD3-204ENST00000439235 DLEC1Q9Y238 1755 aa25.44■■□□□ 1.66
CHD3-204ENST00000439235 RGS3P49796 1198 aa25.43■■□□□ 1.66
CHD3-204ENST00000439235 PUM3Q15397 648 aaKnown RBP25.43■■□□□ 1.66
CHD3-204ENST00000439235 TAF1P21675 1872 aa25.43■■□□□ 1.66
CHD3-204ENST00000439235 ATP2B3Q16720 1220 aa25.42■■□□□ 1.66
CHD3-204ENST00000439235 EAF2Q96CJ1 260 aaPredicted RBP25.42■■□□□ 1.66
CHD3-204ENST00000439235 GPATCH3Q96I76 525 aa25.42■■□□□ 1.66
CHD3-204ENST00000439235 TMX4Q9H1E5 349 aaPredicted RBP25.42■■□□□ 1.66
CHD3-204ENST00000439235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.42■■□□□ 1.66
CHD3-204ENST00000439235 SKAP1Q86WV1 359 aa25.41■■□□□ 1.66
CHD3-204ENST00000439235 C16orf71Q8IYS4 520 aaPredicted RBP25.41■■□□□ 1.66
CHD3-204ENST00000439235 KLHL34Q8N239 644 aa25.41■■□□□ 1.66
CHD3-204ENST00000439235 HELBQ8NG08 1087 aaPredicted RBP25.41■■□□□ 1.66
CHD3-204ENST00000439235 PPP1R1BQ9UD71 204 aaPredicted RBP25.41■■□□□ 1.66
CHD3-204ENST00000439235 A0A1B0GUL7 405 aa25.4■■□□□ 1.66
CHD3-204ENST00000439235 DPEP1P16444 411 aa25.4■■□□□ 1.66
CHD3-204ENST00000439235 MX1P20591 662 aa25.4■■□□□ 1.66
CHD3-204ENST00000439235 PRPF40BQ6NWY9 871 aaKnown RBP25.4■■□□□ 1.66
CHD3-204ENST00000439235 SP8Q8IXZ3 490 aa25.4■■□□□ 1.66
CHD3-204ENST00000439235 ATP6V0A2Q9Y487 856 aa25.4■■□□□ 1.66
CHD3-204ENST00000439235 LRRC37AA6NMS7 1700 aa25.4■■□□□ 1.66
CHD3-204ENST00000439235 SALL3Q9BXA9 1300 aa25.39■■□□□ 1.66
CHD3-204ENST00000439235 SLC5A1P13866 664 aa25.39■■□□□ 1.66
CHD3-204ENST00000439235 PLEKHM2Q8IWE5 1019 aa25.39■■□□□ 1.66
CHD3-204ENST00000439235 OTUD7AQ8TE49 926 aaPredicted RBP25.39■■□□□ 1.66
CHD3-204ENST00000439235 LPIN2Q92539 896 aa25.39■■□□□ 1.66
CHD3-204ENST00000439235 NEUROD6Q96NK8 337 aa25.39■■□□□ 1.66
CHD3-204ENST00000439235 CCDC8Q9H0W5 538 aaPredicted RBP25.39■■□□□ 1.66
CHD3-204ENST00000439235 A0A1B0GUL6 1792 aa25.39■■□□□ 1.65
CHD3-204ENST00000439235 XDHP47989 1333 aa25.38■■□□□ 1.65
CHD3-204ENST00000439235 AOX1Q06278 1338 aa25.38■■□□□ 1.65
CHD3-204ENST00000439235 KIAA1551Q9HCM1 1747 aa25.38■■□□□ 1.65
CHD3-204ENST00000439235 A0A0G2JLW4 131 aa25.38■■□□□ 1.65
CHD3-204ENST00000439235 TAF5LO75529 589 aa25.38■■□□□ 1.65
CHD3-204ENST00000439235 IFIT1P09914 478 aaKnown RBP25.38■■□□□ 1.65
CHD3-204ENST00000439235 UBE4AQ14139 1066 aa25.38■■□□□ 1.65
CHD3-204ENST00000439235 TTLL6Q8N841 843 aa25.38■■□□□ 1.65
CHD3-204ENST00000439235 TTC41PQ6P2S7 1318 aa25.37■■□□□ 1.65
CHD3-204ENST00000439235 FGFR2P21802 821 aa25.37■■□□□ 1.65
CHD3-204ENST00000439235 KCNJ4P48050 445 aa25.37■■□□□ 1.65
CHD3-204ENST00000439235 ANKIB1Q9P2G1 1089 aa25.37■■□□□ 1.65
CHD3-204ENST00000439235 STAP2Q9UGK3 403 aa25.37■■□□□ 1.65
CHD3-204ENST00000439235 PDE1AP54750 535 aa25.36■■□□□ 1.65
CHD3-204ENST00000439235 TIMM10P62072 90 aa25.36■■□□□ 1.65
CHD3-204ENST00000439235 OSBPL3Q9H4L5 887 aa25.36■■□□□ 1.65
CHD3-204ENST00000439235 TLR7Q9NYK1 1049 aaKnown RBP25.36■■□□□ 1.65
CHD3-204ENST00000439235 DBNLQ9UJU6 430 aaKnown RBP25.36■■□□□ 1.65
CHD3-204ENST00000439235 LEMD3Q9Y2U8 911 aa25.36■■□□□ 1.65
CHD3-204ENST00000439235 KCNA3P22001 575 aa25.35■■□□□ 1.65
CHD3-204ENST00000439235 CC2D2BQ6DHV5 1058 aa25.35■■□□□ 1.65
CHD3-204ENST00000439235 DBNDD2Q9BQY9 259 aa25.35■■□□□ 1.65
CHD3-204ENST00000439235 ECHDC1Q9NTX5 307 aa25.35■■□□□ 1.65
CHD3-204ENST00000439235 PODXL2Q9NZ53 605 aa25.35■■□□□ 1.65
CHD3-204ENST00000439235 PIM2Q9P1W9 311 aa25.35■■□□□ 1.65
CHD3-204ENST00000439235 ARAP2Q8WZ64 1704 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 ERC2O15083 957 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 ATP2B4P23634 1241 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 YY1P25490 414 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 GPSM2P81274 684 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 GORABQ5T7V8 394 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 XAGE2Q96GT9 111 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 ZNF804BA4D1E1 1349 aa25.34■■□□□ 1.65
CHD3-204ENST00000439235 GGA1Q9UJY5 639 aa25.33■■□□□ 1.65
CHD3-204ENST00000439235 NSFL1CQ9UNZ2 370 aaKnown RBP25.33■■□□□ 1.65
CHD3-204ENST00000439235 CCDC158Q5M9N0 1113 aa25.32■■□□□ 1.64
CHD3-204ENST00000439235 CACNA1SQ13698 1873 aa25.32■■□□□ 1.64
CHD3-204ENST00000439235 GLRX3O76003 335 aaKnown RBP25.31■■□□□ 1.64
CHD3-204ENST00000439235 ADORA1P30542 326 aa25.31■■□□□ 1.64
CHD3-204ENST00000439235 GRIPAP1Q4V328 841 aa25.31■■□□□ 1.64
CHD3-204ENST00000439235 MPNDQ8N594 471 aa25.31■■□□□ 1.64
CHD3-204ENST00000439235 SLX4Q8IY92 1834 aa25.3■■□□□ 1.64
CHD3-204ENST00000439235 SNAP23O00161 211 aa25.3■■□□□ 1.64
CHD3-204ENST00000439235 UFL1O94874 794 aa25.3■■□□□ 1.64
CHD3-204ENST00000439235 DALRD3Q5D0E6 543 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms