RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 CCDC178Q5BJE1 867 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 ORAI2Q96SN7 254 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 GOLIM4O00461 696 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 SPATA24Q86W54 205 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
TSC2-206ENST00000439117 USP48Q86UV5 1035 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 ARHGEF5Q12774 1597 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 A0A1B0GUA9 196 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 ZNF213O14771 459 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 ANAPC15P60006 121 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
TSC2-206ENST00000439117 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 ABCA8O94911 1581 aa17.16■□□□□ 0.34
TSC2-206ENST00000439117 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.16■□□□□ 0.34
TSC2-206ENST00000439117 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 C6orf163Q5TEZ5 329 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 SNRKQ9NRH2 765 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 MBD5Q9P267 1494 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 BIN1O00499 593 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 UBASH3AP57075 661 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 CEP57Q86XR8 500 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 SLF2Q8IX21 1173 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 LINS1Q8NG48 757 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 ATRIPQ8WXE1 791 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 LIG1P18858 919 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 GSTTP1A0A1W2PQM5 241 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 RNF41Q9H4P4 317 aaPredicted RBP17.15■□□□□ 0.34
TSC2-206ENST00000439117 GOPCQ9HD26 462 aa17.15■□□□□ 0.34
TSC2-206ENST00000439117 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.34
TSC2-206ENST00000439117 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.34
TSC2-206ENST00000439117 JADE2Q9NQC1 790 aa17.14■□□□□ 0.34
TSC2-206ENST00000439117 YEATS2Q9ULM3 1422 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 NSRP1Q9H0G5 558 aaKnown RBP17.14■□□□□ 0.33
TSC2-206ENST00000439117 VPS18Q9P253 973 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 LMTK3Q96Q04 1460 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 CCDC121Q6ZUS5 278 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 ARFGAP2Q8N6H7 521 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 NUCB1Q02818 461 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 IQCA1Q86XH1 822 aa17.14■□□□□ 0.33
TSC2-206ENST00000439117 CCDC102BQ68D86 513 aa17.13■□□□□ 0.33
TSC2-206ENST00000439117 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
TSC2-206ENST00000439117 PPP1R12BO60237 982 aaPredicted RBP17.13■□□□□ 0.33
TSC2-206ENST00000439117 ATP8B2P98198 1209 aa17.13■□□□□ 0.33
TSC2-206ENST00000439117 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
TSC2-206ENST00000439117 FBF1Q8TES7 1133 aa17.13■□□□□ 0.33
TSC2-206ENST00000439117 PIBF1Q8WXW3 757 aa17.13■□□□□ 0.33
TSC2-206ENST00000439117 MPHOSPH10O00566 681 aaKnown RBP17.13■□□□□ 0.33
TSC2-206ENST00000439117 SSBP05455 408 aaKnown RBP eCLIP17.12■□□□□ 0.33
TSC2-206ENST00000439117 LDHCP07864 332 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 SSR1P43307 286 aaKnown RBP17.12■□□□□ 0.33
TSC2-206ENST00000439117 KRT24Q2M2I5 525 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 TDRD12Q587J7 1177 aaKnown RBP17.12■□□□□ 0.33
TSC2-206ENST00000439117 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 UQCRFS1P1P0C7P4 283 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 RSRC1Q96IZ7 334 aaKnown RBP17.12■□□□□ 0.33
TSC2-206ENST00000439117 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
TSC2-206ENST00000439117 IL13P35225 146 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 TSG101Q99816 390 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 PTGS1P23219 599 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
TSC2-206ENST00000439117 ZNF444Q8N0Y2 327 aaPredicted RBP17.11■□□□□ 0.33
TSC2-206ENST00000439117 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
TSC2-206ENST00000439117 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 SOS1Q07889 1333 aaPredicted RBP17.11■□□□□ 0.33
TSC2-206ENST00000439117 LTKP29376 864 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 ANKS4BQ8N8V4 417 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 TYRO3Q06418 890 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 PLEKHG3A1L390 1219 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 STAMBPO95630 424 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 GUCY1B3Q02153 619 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 HDXQ7Z353 690 aa17.11■□□□□ 0.33
TSC2-206ENST00000439117 PYM1Q9BRP8 204 aaKnown RBP17.11■□□□□ 0.33
TSC2-206ENST00000439117 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
TSC2-206ENST00000439117 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■■□ 21.9
TSC2-206ENST00000439117 ST5P78524 1137 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 ATP2C2O75185 946 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 SYT1P21579 422 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 CEP63Q96MT8 703 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 CTAGE1Q96RT6 745 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 CPSF2Q9P2I0 782 aaKnown RBP17.1■□□□□ 0.33
TSC2-206ENST00000439117 CCDC6Q16204 474 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 PPM1EQ8WY54 764 aa17.1■□□□□ 0.33
TSC2-206ENST00000439117 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
TSC2-206ENST00000439117 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms