RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CHMP4CQ96CF2 233 aa15.63■□□□□ 0.09
ACTN1-204ENST00000438964 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-204ENST00000438964 TEX35Q5T0J7 233 aa15.62■□□□□ 0.09
ACTN1-204ENST00000438964 GPATCH3Q96I76 525 aa15.62■□□□□ 0.09
ACTN1-204ENST00000438964 FAM53CQ9NYF3 392 aa15.62■□□□□ 0.09
ACTN1-204ENST00000438964 FEZ2Q9UHY8 353 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-204ENST00000438964 TMEM131LA2VDJ0 1609 aa15.62■□□□□ 0.09
ACTN1-204ENST00000438964 TNNT3P45378 269 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-204ENST00000438964 ZRSR1Q15695 479 aaKnown RBP15.62■□□□□ 0.09
ACTN1-204ENST00000438964 UTP14AQ9BVJ6 771 aaKnown RBP15.62■□□□□ 0.09
ACTN1-204ENST00000438964 ADD1P35611 737 aaKnown RBP15.62■□□□□ 0.09
ACTN1-204ENST00000438964 NDUFA8P51970 172 aa15.62■□□□□ 0.09
ACTN1-204ENST00000438964 RNF20Q5VTR2 975 aa15.62■□□□□ 0.09
ACTN1-204ENST00000438964 GPHNQ9NQX3 736 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-204ENST00000438964 TTC41PQ6P2S7 1318 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 OAS2P29728 719 aaKnown RBP15.61■□□□□ 0.09
ACTN1-204ENST00000438964 CDC25BP30305 580 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 PIP4K2AP48426 406 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-204ENST00000438964 MAP3K5Q99683 1374 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 SARM1Q6SZW1 724 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 DDX46Q7L014 1031 aaKnown RBP15.61■□□□□ 0.09
ACTN1-204ENST00000438964 DPF2Q92785 391 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 NEK1Q96PY6 1258 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 ANO10Q9NW15 660 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 COL15A1P39059 1388 aa15.61■□□□□ 0.09
ACTN1-204ENST00000438964 PEAK1Q9H792 1746 aa15.6■□□□□ 0.09
ACTN1-204ENST00000438964 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
ACTN1-204ENST00000438964 NLRP6P59044 892 aa15.6■□□□□ 0.09
ACTN1-204ENST00000438964 NGDNQ8NEJ9 315 aaKnown RBP15.6■□□□□ 0.09
ACTN1-204ENST00000438964 BICC1Q9H694 974 aaKnown RBP15.6■□□□□ 0.09
ACTN1-204ENST00000438964 CFAP45Q9UL16 551 aa15.6■□□□□ 0.09
ACTN1-204ENST00000438964 PTPDC1A2A3K4 754 aa15.6■□□□□ 0.09
ACTN1-204ENST00000438964 MPRIPQ6WCQ1 1025 aa15.6■□□□□ 0.09
ACTN1-204ENST00000438964 RSPH14Q9UHP6 348 aa15.6■□□□□ 0.09
ACTN1-204ENST00000438964 NPHP4O75161 1426 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-204ENST00000438964 EPB41L2O43491 1005 aaKnown RBP15.6■□□□□ 0.09
ACTN1-204ENST00000438964 G3BP1Q13283 466 aaKnown RBP eCLIP15.6■□□□□ 0.097e-8■■□□□ 12.9
ACTN1-204ENST00000438964 SUCLG2Q96I99 432 aa15.6■□□□□ 0.09
ACTN1-204ENST00000438964 ORC3Q9UBD5 711 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-204ENST00000438964 DLC1Q96QB1 1528 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 CYP21A2P08686 494 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 EVCP57679 992 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 SF3A1Q15459 793 aaKnown RBP15.59■□□□□ 0.09
ACTN1-204ENST00000438964 SLC26A8Q96RN1 970 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 PCDHA7Q9UN72 937 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 XRN1Q8IZH2 1706 aaKnown RBP15.59■□□□□ 0.09
ACTN1-204ENST00000438964 TULP2O00295 520 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 TAF5LO75529 589 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 LMAN1P49257 510 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 ANKRD1Q15327 319 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 STOX1Q6ZVD7 989 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 CCDC191Q8NCU4 936 aa15.59■□□□□ 0.09
ACTN1-204ENST00000438964 TMEM232C9JQI7 657 aa15.58■□□□□ 0.09
ACTN1-204ENST00000438964 NEMFO60524 1076 aa15.58■□□□□ 0.09
ACTN1-204ENST00000438964 CTDNEP1O95476 244 aa15.58■□□□□ 0.09
ACTN1-204ENST00000438964 TFRCP02786 760 aaKnown RBP15.58■□□□□ 0.09
ACTN1-204ENST00000438964 MARCKSP29966 332 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-204ENST00000438964 FAM160A1Q05DH4 1040 aa15.58■□□□□ 0.08
ACTN1-204ENST00000438964 HSP90AB4PQ58FF6 505 aa15.58■□□□□ 0.08
ACTN1-204ENST00000438964 CLIC4Q9Y696 253 aa15.58■□□□□ 0.08
ACTN1-204ENST00000438964 ILDR1Q86SU0 546 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-204ENST00000438964 PDILTQ8N807 584 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 KCNB2Q92953 911 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 IRX2Q9BZI1 471 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-204ENST00000438964 PLEKHA4Q9H4M7 779 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 L2HGDHQ9H9P8 463 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 CCDC93Q567U6 631 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 WWC2Q6AWC2 1192 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-204ENST00000438964 NSUN7Q8NE18 718 aaKnown RBP15.57■□□□□ 0.08
ACTN1-204ENST00000438964 ENGASEQ8NFI3 743 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 WDR24Q96S15 920 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 DESI2Q9BSY9 194 aa15.57■□□□□ 0.08
ACTN1-204ENST00000438964 KARSQ15046 597 aaKnown RBP15.56■□□□□ 0.08
ACTN1-204ENST00000438964 ETF1P62495 437 aaKnown RBP15.56■□□□□ 0.08
ACTN1-204ENST00000438964 CFAP100Q494V2 611 aa15.56■□□□□ 0.08
ACTN1-204ENST00000438964 KAZALD1Q96I82 304 aa15.56■□□□□ 0.08
ACTN1-204ENST00000438964 ARHGEF10O15013 1369 aa15.56■□□□□ 0.08
ACTN1-204ENST00000438964 PHACTR2O75167 634 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 ZRANB2O95218 330 aaKnown RBP eCLIP15.55■□□□□ 0.08
ACTN1-204ENST00000438964 SERPINC1P01008 464 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 SMC1AQ14683 1233 aaKnown RBP15.55■□□□□ 0.08
ACTN1-204ENST00000438964 ZSCAN26Q16670 478 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 ROBO2Q9HCK4 1378 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 TBC1D8O95759 1140 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 EIF4A1P60842 406 aaKnown RBP15.55■□□□□ 0.08
ACTN1-204ENST00000438964 MCM6Q14566 821 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 STK38Q15208 465 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 FOXR1Q6PIV2 292 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 SUGCTQ9HAC7 445 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 RCOR1Q9UKL0 485 aa15.55■□□□□ 0.08
ACTN1-204ENST00000438964 MYL6BP14649 208 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 GSDMDP57764 484 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 GNG11P61952 73 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 ARGLU1Q9NWB6 273 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-204ENST00000438964 IGSF1Q8N6C5 1336 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 HAND2P61296 217 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 FANCCQ00597 558 aa15.54■□□□□ 0.08
ACTN1-204ENST00000438964 MRPS27Q92552 414 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms