RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 TRIM17Q9Y577 477 aa16.52■□□□□ 0.24
SMAD9-IT1-201ENST00000437983 RTL9Q8NET4 1388 aa16.51■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 ANGEL2Q5VTE6 544 aaKnown RBP16.51■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 H0YGN5 161 aa16.5■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 KIF6Q6ZMV9 814 aa16.5■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 MYL6BP14649 208 aa16.49■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 RPS12P25398 132 aaKnown RBP16.49■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 FKBP1BP68106 108 aa16.49■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 DOK7Q18PE1 504 aa16.49■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 POTEHQ6S545 545 aa16.49■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 MIS18AQ9NYP9 233 aa16.49■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 RANBP2P49792 3224 aaKnown RBP16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 COL6A3P12111 3177 aa16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 SCARF1Q14162 830 aa16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 WASHC4Q2M389 1173 aa16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 CFHR5Q9BXR6 569 aa16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 RBBP6Q7Z6E9 1792 aaKnown RBP16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 TAF1P21675 1872 aa16.48■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 ECE2O60344 883 aa16.47■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 GRAPQ13588 217 aa16.46■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.23
SMAD9-IT1-201ENST00000437983 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 NUBP1P53384 320 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 GSE1Q14687 1217 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 DDX46Q7L014 1031 aaKnown RBP16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 HS6ST3Q8IZP7 471 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 POLLQ9UGP5 575 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 LAMB2P55268 1798 aa16.45■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 PARP10Q53GL7 1025 aa16.44■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 RNF25Q96BH1 459 aaPredicted RBP16.44■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 ARMC5Q96C12 935 aa16.44■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 RBM27Q9P2N5 1060 aaKnown RBP16.44■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 CAP1Q01518 475 aa16.43■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 SREBF2Q12772 1141 aa16.43■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 TTLL12Q14166 644 aaPredicted RBP16.43■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 SCN9AQ15858 1988 aa16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 PRKCSHP14314 528 aaPredicted RBP16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 ZNF280AP59817 542 aaPredicted RBP16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 GPSM2P81274 684 aa16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 CD99L2Q8TCZ2 262 aa16.41■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 LRRC37AA6NMS7 1700 aa16.41■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 ANKRD36CQ5JPF3 1778 aa16.41■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 COL4A1P02462 1669 aa16.4■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 PRKG1Q13976 671 aa16.4■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 CELF1Q92879 486 aaKnown RBP16.4■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
SMAD9-IT1-201ENST00000437983 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 SPRYD7Q5W111 196 aa16.38■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 IFNL1Q8IU54 200 aa16.38■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 PITPNM2Q9BZ72 1349 aa16.38■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 IGF2BP3O00425 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 ALDH1A1P00352 501 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 MYCP01106 439 aaPredicted RBP16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 NBPF9Q3BBW0 867 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 TMC4Q7Z404 712 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 EFCC1Q9HA90 598 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 ZNF609O15014 1411 aa16.36■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 TCIRG1Q13488 830 aa16.36■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 ERO1AQ96HE7 468 aa16.36■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 GMLQ99445 158 aa16.36■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 EYA3Q99504 573 aa16.36■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 ANXA1P04083 346 aa16.35■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms