RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 IVLP07476 585 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 JPH2Q9BR39 696 aaPredicted RBP8.58□□□□□ -1.04
PTPN20-210ENST00000437863 ZSCAN16Q9H4T2 348 aaPredicted RBP8.58□□□□□ -1.04
PTPN20-210ENST00000437863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPN20-210ENST00000437863 TUBGCP6Q96RT7 1819 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.58□□□□□ -1.04
PTPN20-210ENST00000437863 FIBPO43427 364 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 CDC45O75419 566 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 HOXB7P09629 217 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 CORO7P57737 925 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 CCDC144BQ3MJ40 725 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 ARMC3Q5W041 872 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 CCDC144CPQ8IYA2 1237 aa8.58□□□□□ -1.04
PTPN20-210ENST00000437863 COL16A1Q07092 1604 aaPredicted RBP8.57□□□□□ -1.04
PTPN20-210ENST00000437863 KLHL33A6NCF5 533 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 RNF20Q5VTR2 975 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 ROBO1Q9Y6N7 1651 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 SPATA31A3Q5VYP0 1347 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 ZRSR1Q15695 479 aaKnown RBP8.57□□□□□ -1.04
PTPN20-210ENST00000437863 UBXN4Q92575 508 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 EXOC4Q96A65 974 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 VPS18Q9P253 973 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 CLIP2Q9UDT6 1046 aa8.57□□□□□ -1.04
PTPN20-210ENST00000437863 IPO8O15397 1037 aaKnown RBP8.56□□□□□ -1.04
PTPN20-210ENST00000437863 LIG3P49916 1009 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 NEK4P51957 841 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 ZC3H12AQ5D1E8 599 aaKnown RBP8.56□□□□□ -1.04
PTPN20-210ENST00000437863 FBXW10Q5XX13 1052 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 KAT2BQ92831 832 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 FAXDC2Q96IV6 333 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 TMX3Q96JJ7 454 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 HEG1Q9ULI3 1381 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 SKILP12757 684 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 NLRP6P59044 892 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 TRDNQ13061 729 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 RRS1Q15050 365 aaKnown RBP8.56□□□□□ -1.04
PTPN20-210ENST00000437863 CAMK4Q16566 473 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 CPLX2Q6PUV4 134 aaKnown RBP8.56□□□□□ -1.04
PTPN20-210ENST00000437863 GBP6Q6ZN66 633 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 FILIP1Q7Z7B0 1213 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 TADA2BQ86TJ2 420 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 PHACTR3Q96KR7 559 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 ABCC4O15439 1325 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 RGS12O14924 1447 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 KIF2AO00139 706 aaPredicted RBP8.56□□□□□ -1.04
PTPN20-210ENST00000437863 TBC1D8O95759 1140 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 TRIM27P14373 513 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 AMOTQ4VCS5 1084 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 ISM2Q6H9L7 571 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 NYAP1Q6ZVC0 841 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 OTUD6BQ8N6M0 293 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 ABTB2Q8N961 1025 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 MIEF2Q96C03 454 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 EYA1Q99502 592 aa8.56□□□□□ -1.04
PTPN20-210ENST00000437863 CCDC171Q6TFL3 1326 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 H3BQF6 201 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 ATF3P18847 181 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 ZKSCAN8Q15776 578 aaPredicted RBP8.55□□□□□ -1.04
PTPN20-210ENST00000437863 ITFG2Q969R8 447 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 THOC1Q96FV9 657 aaKnown RBP8.55□□□□□ -1.04
PTPN20-210ENST00000437863 C1orf115Q9H7X2 142 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 RREB1Q92766 1687 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 FRMD3A2A2Y4 597 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 DTNBO60941 627 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 LIG1P18858 919 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 HNRNPH1P31943 449 aaKnown RBP8.55□□□□□ -1.04
PTPN20-210ENST00000437863 KRT28Q7Z3Y7 464 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 IQUBQ8NA54 791 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 FUCA2Q9BTY2 467 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 C5P01031 1676 aa8.55□□□□□ -1.04
PTPN20-210ENST00000437863 KIF3CO14782 793 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 VAMP4O75379 141 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 CCDC192P0DO97 292 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 CCT2P78371 535 aaKnown RBP8.54□□□□□ -1.04
PTPN20-210ENST00000437863 GNL2Q13823 731 aaKnown RBP8.54□□□□□ -1.04
PTPN20-210ENST00000437863 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 N4BP2L2Q92802 583 aaPredicted RBP8.54□□□□□ -1.04
PTPN20-210ENST00000437863 PRDM16Q9HAZ2 1276 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 ORC3Q9UBD5 711 aaPredicted RBP8.54□□□□□ -1.04
PTPN20-210ENST00000437863 DDX19BQ9UMR2 479 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 TCHHQ07283 1943 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 ZNF75DP51815 510 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 EFCAB13Q8IY85 973 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 TMEM57Q8N5G2 664 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 MRPL50Q8N5N7 158 aaKnown RBP8.54□□□□□ -1.04
PTPN20-210ENST00000437863 TBC1D22AQ8WUA7 517 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 ERLIN2O94905 339 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 AMPHP49418 695 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 CKAP2LQ8IYA6 745 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 UBXN6Q9BZV1 441 aa8.54□□□□□ -1.04
PTPN20-210ENST00000437863 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPN20-210ENST00000437863 PHLPP1O60346 1717 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 PHACTR2O75167 634 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 EXOSC9Q06265 439 aaKnown RBP8.53□□□□□ -1.04
PTPN20-210ENST00000437863 NUP188Q5SRE5 1749 aa8.53□□□□□ -1.04
PTPN20-210ENST00000437863 CCDC30Q5VVM6 783 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms