RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 ATP5JP18859 108 aa16.56■□□□□ 0.24
HLA-DPA1-243ENST00000437811 TM4SF1P30408 202 aa16.56■□□□□ 0.24
HLA-DPA1-243ENST00000437811 METTL24Q5JXM2 366 aa16.56■□□□□ 0.24
HLA-DPA1-243ENST00000437811 QSER1Q2KHR3 1735 aa16.56■□□□□ 0.24
HLA-DPA1-243ENST00000437811 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
HLA-DPA1-243ENST00000437811 A0A1B0GUL7 405 aa16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 TBC1D32Q96NH3 1257 aa16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 A0A1B0GUL6 1792 aa16.55■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CHMLP26374 656 aa16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 TIMM10P62072 90 aa16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 EZH2Q15910 746 aaKnown RBP16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 MPHOSPH8Q99549 860 aa16.54■□□□□ 0.24
HLA-DPA1-243ENST00000437811 PNPLA7Q6ZV29 1317 aa16.53■□□□□ 0.24
HLA-DPA1-243ENST00000437811 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
HLA-DPA1-243ENST00000437811 PRR5LQ6MZQ0 368 aa16.53■□□□□ 0.24
HLA-DPA1-243ENST00000437811 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
HLA-DPA1-243ENST00000437811 EP400Q96L91 3159 aa16.53■□□□□ 0.24
HLA-DPA1-243ENST00000437811 NRXN2Q9P2S2 1712 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 NPHP1O15259 732 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 PDE8BO95263 885 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 SERPINB2P05120 415 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 BAG6P46379 1132 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 DDR1Q08345 913 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 SF3B2Q13435 895 aaKnown RBP16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 CCDC24Q8N4L8 307 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.24
HLA-DPA1-243ENST00000437811 POLRMTO00411 1230 aaKnown RBP16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 ADORA1P30542 326 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 ANKRD18AQ8IVF6 992 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 TAF1P21675 1872 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 FGFR2P21802 821 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 ST5P78524 1137 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 NLGN1Q8N2Q7 840 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 HAUS7Q99871 368 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
HLA-DPA1-243ENST00000437811 RFX7Q2KHR2 1363 aa16.5■□□□□ 0.23
HLA-DPA1-243ENST00000437811 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
HLA-DPA1-243ENST00000437811 SLC15A2Q16348 729 aa16.5■□□□□ 0.23
HLA-DPA1-243ENST00000437811 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
HLA-DPA1-243ENST00000437811 REC8O95072 547 aa16.49■□□□□ 0.23
HLA-DPA1-243ENST00000437811 CHRNDQ07001 517 aa16.49■□□□□ 0.23
HLA-DPA1-243ENST00000437811 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
HLA-DPA1-243ENST00000437811 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
HLA-DPA1-243ENST00000437811 LPIN2Q92539 896 aa16.49■□□□□ 0.23
HLA-DPA1-243ENST00000437811 BSDC1Q9NW68 430 aaPredicted RBP16.49■□□□□ 0.23
HLA-DPA1-243ENST00000437811 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
HLA-DPA1-243ENST00000437811 SLC5A1P13866 664 aa16.48■□□□□ 0.23
HLA-DPA1-243ENST00000437811 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
HLA-DPA1-243ENST00000437811 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
HLA-DPA1-243ENST00000437811 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
HLA-DPA1-243ENST00000437811 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
HLA-DPA1-243ENST00000437811 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
HLA-DPA1-243ENST00000437811 ANKRD31Q8N7Z5 1873 aa16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 HIP1O00291 1037 aa16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 IPO9Q96P70 1041 aaKnown RBP16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 DIAPH3Q9NSV4 1193 aa16.47■□□□□ 0.23
HLA-DPA1-243ENST00000437811 SGSM2O43147 1006 aa16.46■□□□□ 0.23
HLA-DPA1-243ENST00000437811 TAF5LO75529 589 aa16.46■□□□□ 0.23
HLA-DPA1-243ENST00000437811 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.23
HLA-DPA1-243ENST00000437811 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
HLA-DPA1-243ENST00000437811 EDC3Q96F86 508 aaKnown RBP16.46■□□□□ 0.23
HLA-DPA1-243ENST00000437811 ZNF512BQ96KM6 892 aaPredicted RBP16.46■□□□□ 0.23
HLA-DPA1-243ENST00000437811 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
HLA-DPA1-243ENST00000437811 GRAPQ13588 217 aa16.45■□□□□ 0.22
HLA-DPA1-243ENST00000437811 GRAPLQ8TC17 118 aaPredicted RBP16.45■□□□□ 0.22
HLA-DPA1-243ENST00000437811 RUFY2Q8WXA3 655 aa16.45■□□□□ 0.22
HLA-DPA1-243ENST00000437811 PAG1Q9NWQ8 432 aa16.45■□□□□ 0.22
HLA-DPA1-243ENST00000437811 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
HLA-DPA1-243ENST00000437811 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
HLA-DPA1-243ENST00000437811 RAD50Q92878 1312 aa16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 AKAP11Q9UKA4 1901 aa16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 EPB41L2O43491 1005 aaKnown RBP16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 MMP10P09238 476 aa16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 IL25Q9H293 177 aa16.44■□□□□ 0.22
HLA-DPA1-243ENST00000437811 GOLIM4O00461 696 aa16.43■□□□□ 0.22
HLA-DPA1-243ENST00000437811 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms