RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 MYH14Q7Z406 1995 aaKnown RBP11.59□□□□□ -0.55
NIF3L1-208ENST00000436412 KCPQ6ZWJ8 1503 aa11.59□□□□□ -0.55
NIF3L1-208ENST00000436412 TNRC6CQ9HCJ0 1690 aaKnown RBP11.59□□□□□ -0.55
NIF3L1-208ENST00000436412 COL5A3P25940 1745 aaPredicted RBP11.58□□□□□ -0.56
NIF3L1-208ENST00000436412 SBF1O95248 1867 aa11.58□□□□□ -0.56
NIF3L1-208ENST00000436412 WNT7AO00755 349 aa11.58□□□□□ -0.56
NIF3L1-208ENST00000436412 POLKQ9UBT6 870 aa11.58□□□□□ -0.56
NIF3L1-208ENST00000436412 VEGFAP15692 232 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-208ENST00000436412 CABP4P57796 275 aa11.57□□□□□ -0.56
NIF3L1-208ENST00000436412 AMOTQ4VCS5 1084 aa11.57□□□□□ -0.56
NIF3L1-208ENST00000436412 PLEKHO1Q53GL0 409 aaPredicted RBP11.57□□□□□ -0.56
NIF3L1-208ENST00000436412 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
NIF3L1-208ENST00000436412 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
NIF3L1-208ENST00000436412 USP42Q9H9J4 1324 aaKnown RBP11.57□□□□□ -0.56
NIF3L1-208ENST00000436412 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
NIF3L1-208ENST00000436412 CRKLP46109 303 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-208ENST00000436412 SKOR1P84550 965 aa11.56□□□□□ -0.56
NIF3L1-208ENST00000436412 DDR1Q08345 913 aa11.56□□□□□ -0.56
NIF3L1-208ENST00000436412 EIF4A2Q14240 407 aaKnown RBP11.56□□□□□ -0.56
NIF3L1-208ENST00000436412 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
NIF3L1-208ENST00000436412 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
NIF3L1-208ENST00000436412 GLTPD2A6NH11 291 aa11.55□□□□□ -0.56
NIF3L1-208ENST00000436412 AVPP01185 164 aa11.55□□□□□ -0.56
NIF3L1-208ENST00000436412 LMNB1P20700 586 aa11.55□□□□□ -0.56
NIF3L1-208ENST00000436412 TM4SF1P30408 202 aa11.55□□□□□ -0.56
NIF3L1-208ENST00000436412 ZNF787Q6DD87 383 aa11.55□□□□□ -0.56
NIF3L1-208ENST00000436412 AAASQ9NRG9 546 aa11.55□□□□□ -0.56
NIF3L1-208ENST00000436412 KDM6AO15550 1401 aaPredicted RBP11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 POTECB2RU33 542 aa11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 ST8SIA5O15466 376 aa11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 PTCD1O75127 700 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 CHRNA5P30532 468 aa11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 MTHFSP49914 203 aa11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 PDE4DQ08499 809 aa11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 ZNF530Q6P9A1 599 aaPredicted RBP11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 RSBN1LQ6PCB5 846 aaPredicted RBP11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 CYP4X1Q8N118 509 aa11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 SRP68Q9UHB9 627 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-208ENST00000436412 HSPA1AP0DMV8 641 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-208ENST00000436412 HSPA1BP0DMV9 641 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-208ENST00000436412 GJA5P36382 358 aa11.53□□□□□ -0.56
NIF3L1-208ENST00000436412 C1orf141Q5JVX7 400 aa11.53□□□□□ -0.56
NIF3L1-208ENST00000436412 MRGPRX2Q96LB1 330 aa11.53□□□□□ -0.56
NIF3L1-208ENST00000436412 NUDT12Q9BQG2 462 aa11.53□□□□□ -0.56
NIF3L1-208ENST00000436412 CRIPAKQ8N1N5 446 aa11.52□□□□□ -0.57
NIF3L1-208ENST00000436412 NFATC2IPQ8NCF5 419 aa11.52□□□□□ -0.57
NIF3L1-208ENST00000436412 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
NIF3L1-208ENST00000436412 SPTLC1O15269 473 aa11.51□□□□□ -0.57
NIF3L1-208ENST00000436412 INTS5Q6P9B9 1019 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-208ENST00000436412 TTLL6Q8N841 843 aa11.51□□□□□ -0.57
NIF3L1-208ENST00000436412 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
NIF3L1-208ENST00000436412 SMPD1P17405 629 aa11.5□□□□□ -0.57
NIF3L1-208ENST00000436412 WNT7BP56706 349 aa11.5□□□□□ -0.57
NIF3L1-208ENST00000436412 RASSF7Q02833 373 aa11.5□□□□□ -0.57
NIF3L1-208ENST00000436412 MTMR2Q13614 643 aa11.5□□□□□ -0.57
NIF3L1-208ENST00000436412 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
NIF3L1-208ENST00000436412 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 DIXDC1Q155Q3 683 aa11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 PTPRNQ16849 979 aa11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 SNIP1Q8TAD8 396 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-208ENST00000436412 H0YIN7 160 aa11.48□□□□□ -0.57
NIF3L1-208ENST00000436412 NFIXQ14938 502 aa11.48□□□□□ -0.57
NIF3L1-208ENST00000436412 DESI1Q6ICB0 168 aa11.48□□□□□ -0.57
NIF3L1-208ENST00000436412 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
NIF3L1-208ENST00000436412 CCDC88AQ3V6T2 1871 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 AFDNP55196 1824 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 TJP1Q07157 1748 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 TTC24A2A3L6 582 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 SPDYE5A6NIY4 337 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 J3QL48 77 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 SERPINB2P05120 415 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 C2CD5Q86YS7 1000 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 DNAJC10Q8IXB1 793 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 EVA1BQ9NVM1 165 aa11.47□□□□□ -0.57
NIF3L1-208ENST00000436412 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.57
NIF3L1-208ENST00000436412 COL15A1P39059 1388 aa11.46□□□□□ -0.57
NIF3L1-208ENST00000436412 CFAP99D6REC4 459 aa11.46□□□□□ -0.57
NIF3L1-208ENST00000436412 NFKBIEO00221 500 aa11.46□□□□□ -0.57
NIF3L1-208ENST00000436412 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
NIF3L1-208ENST00000436412 RIC3Q7Z5B4 369 aa11.46□□□□□ -0.57
NIF3L1-208ENST00000436412 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
NIF3L1-208ENST00000436412 DLEC1Q9Y238 1755 aa11.46□□□□□ -0.58
NIF3L1-208ENST00000436412 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-208ENST00000436412 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
NIF3L1-208ENST00000436412 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
NIF3L1-208ENST00000436412 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-208ENST00000436412 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
NIF3L1-208ENST00000436412 TIAM2Q8IVF5 1701 aa11.44□□□□□ -0.58
NIF3L1-208ENST00000436412 A0A087WZG4 1122 aa11.44□□□□□ -0.58
NIF3L1-208ENST00000436412 PDE6BP35913 854 aa11.44□□□□□ -0.58
NIF3L1-208ENST00000436412 ERFEQ4G0M1 354 aa11.44□□□□□ -0.58
NIF3L1-208ENST00000436412 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
NIF3L1-208ENST00000436412 SULT6B1Q6IMI4 303 aa11.44□□□□□ -0.58
NIF3L1-208ENST00000436412 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms