RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 DCDC2BA2VCK2 349 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 EREGO14944 169 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 EFSO43281 561 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 MAPTP10636 758 aaKnown RBP7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 XRCC5P13010 732 aaKnown RBP7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 HDLBPQ00341 1268 aaKnown RBP7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 PLAURQ03405 335 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 TNP2Q05952 138 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 HYAL2Q12891 473 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 TAF1CQ15572 869 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 KRT25Q7Z3Z0 450 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 NCAPG2Q86XI2 1143 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 NT5DC4Q86YG4 428 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 OR13H1Q8NG92 308 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 WHAMMQ8TF30 809 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 KLRG1Q96E93 195 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 TGIF2Q9GZN2 237 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 RBSNQ9H1K0 784 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 EHD4Q9H223 541 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 SUV39H2Q9H5I1 410 aa7.08□□□□□ -1.28
HMGB1P45-201ENST00000435986 SOX18P35713 384 aa7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 ST13P50502 369 aaKnown RBP7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 SPEM2Q0P670 501 aa7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 SFSWAPQ12872 951 aaKnown RBP7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 USPL1Q5W0Q7 1092 aa7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 SREK1Q8WXA9 508 aaKnown RBP7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 DRC1Q96MC2 740 aa7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 BCO2Q9BYV7 579 aa7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
HMGB1P45-201ENST00000435986 MAP3K6O95382 1288 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 POLR3DP05423 398 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 NFKB1P19838 968 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 TARSP26639 723 aaKnown RBP7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 FANCCQ00597 558 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 NAALADL2Q58DX5 795 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 KIAA0319Q5VV43 1072 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 BHMTQ93088 406 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 MBIPQ9NS73 344 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 TLR7Q9NYK1 1049 aaKnown RBP7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 CNTN3Q9P232 1028 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 USP31Q70CQ4 1352 aa7.06□□□□□ -1.28
HMGB1P45-201ENST00000435986 SHROOM4Q9ULL8 1493 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 FAM177BA6PVY3 158 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 MMP20O60882 483 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 ADAMTS2O95450 1211 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 USP17L7P0C7H9 530 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 RLBP1P12271 317 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 SRSF11Q05519 484 aaKnown RBP7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 PWP1Q13610 501 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 FAM182BQ5T319 152 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 ZNF385CQ66K41 422 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 DIEXFQ68CQ4 756 aaKnown RBP7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 NXPE4Q6UWF7 544 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 VPS37DQ86XT2 251 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 OSBPL7Q9BZF2 842 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 CHRDQ9H2X0 955 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 NDFIP2Q9NV92 336 aa7.05□□□□□ -1.28
HMGB1P45-201ENST00000435986 BNIP3LO60238 219 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 FGFR3P22607 806 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 IRS1P35568 1242 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 C9orf131Q5VYM1 1079 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 ZNF654Q8IZM8 581 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 ABHD17AQ96GS6 310 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 RNF19AQ9NV58 838 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 GGT7Q9UJ14 662 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 PPM1HQ9ULR3 514 aa7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 TTF2Q9UNY4 1162 aaKnown RBP7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 NSFL1CQ9UNZ2 370 aaKnown RBP7.04□□□□□ -1.28
HMGB1P45-201ENST00000435986 GHRHP01286 108 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 GRNP28799 593 aaKnown RBP7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 NRLP54845 237 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 PI16Q6UXB8 463 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 DTHD1Q6ZMT9 781 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 DHX32Q7L7V1 743 aaKnown RBP7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 LIN7BQ9HAP6 207 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 SALL4Q9UJQ4 1053 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 IGF1RP08069 1367 aa7.03□□□□□ -1.28
HMGB1P45-201ENST00000435986 A0A1W2PP55 124 aa7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 FAM181BA6NEQ2 426 aa7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 CTSHP09668 335 aa7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 CD33P20138 364 aa7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 GRM2Q14416 872 aa7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 PRPF40BQ6NWY9 871 aaKnown RBP7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 USP48Q86UV5 1035 aa7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 METTL16Q86W50 562 aaKnown RBP7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 NOC4LQ9BVI4 516 aaKnown RBP7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 CEP44Q9C0F1 390 aa7.02□□□□□ -1.29
HMGB1P45-201ENST00000435986 ARHGEF15O94989 841 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 KIF4AO95239 1232 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 HOXD8P13378 290 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 GSK3AP49840 483 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 FCGRTP55899 365 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 PTPN12Q05209 780 aaKnown RBP7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 LDLRAD1Q5T700 205 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 LYPD4Q6UWN0 246 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 RELL1Q8IUW5 271 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 MICALL1Q8N3F8 863 aa7.01□□□□□ -1.29
HMGB1P45-201ENST00000435986 SLC43A3Q8NBI5 491 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms