RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TNNT3P45378 269 aaPredicted RBP18.03■□□□□ 0.48
NEDD4-202ENST00000435532 VPS36Q86VN1 386 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 IL13P35225 146 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 HDAC1Q13547 482 aaPredicted RBP18.03■□□□□ 0.48
NEDD4-202ENST00000435532 HSP90B2PQ58FF3 399 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 TEX35Q5T0J7 233 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 JAKMIP3Q5VZ66 844 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 ORC3Q9UBD5 711 aaPredicted RBP18.03■□□□□ 0.48
NEDD4-202ENST00000435532 CWF19L2Q2TBE0 894 aaKnown RBP18.03■□□□□ 0.48
NEDD4-202ENST00000435532 CCDC144CPQ8IYA2 1237 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 HECW2Q9P2P5 1572 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 PUM3Q15397 648 aaKnown RBP18.03■□□□□ 0.48
NEDD4-202ENST00000435532 RTN1Q16799 776 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 BIN2Q9UBW5 565 aaPredicted RBP18.03■□□□□ 0.48
NEDD4-202ENST00000435532 SETQ01105 290 aaPredicted RBP18.03■□□□□ 0.48
NEDD4-202ENST00000435532 MAP3K11Q16584 847 aa18.03■□□□□ 0.48
NEDD4-202ENST00000435532 HELBQ8NG08 1087 aaPredicted RBP18.02■□□□□ 0.48
NEDD4-202ENST00000435532 ITGA6P23229 1130 aa18.02■□□□□ 0.48
NEDD4-202ENST00000435532 ZCCHC11Q5TAX3 1644 aaKnown RBP18.02■□□□□ 0.48
NEDD4-202ENST00000435532 TBCAO75347 108 aaKnown RBP18.02■□□□□ 0.48
NEDD4-202ENST00000435532 RRP36Q96EU6 259 aaKnown RBP18.02■□□□□ 0.48
NEDD4-202ENST00000435532 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.48
NEDD4-202ENST00000435532 KDM5CP41229 1560 aa18.02■□□□□ 0.47
NEDD4-202ENST00000435532 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.47
NEDD4-202ENST00000435532 GUCY1B3Q02153 619 aa18.01■□□□□ 0.47
NEDD4-202ENST00000435532 WDR66Q8TBY9 1149 aa18.01■□□□□ 0.47
NEDD4-202ENST00000435532 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
NEDD4-202ENST00000435532 SSR1P43307 286 aaKnown RBP18.01■□□□□ 0.47
NEDD4-202ENST00000435532 UBA7P41226 1012 aa18.01■□□□□ 0.47
NEDD4-202ENST00000435532 FERMT3Q86UX7 667 aa18.01■□□□□ 0.47
NEDD4-202ENST00000435532 SYCP3Q8IZU3 236 aa18.01■□□□□ 0.47
NEDD4-202ENST00000435532 C6orf50Q9HD87 102 aa18.01■□□□□ 0.47
NEDD4-202ENST00000435532 NCBP1Q09161 790 aaKnown RBP18.01■□□□□ 0.47
NEDD4-202ENST00000435532 CTAGE5O15320 804 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 TFCP2Q12800 502 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 TEX11Q8IYF3 940 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 KLF18A0A0U1RQI7 1052 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 DPY19L2Q6NUT2 758 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 KANK3Q6NY19 840 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 HEATR3Q7Z4Q2 680 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 TCIRG1Q13488 830 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 TAF4BQ92750 862 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 BICD1Q96G01 975 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 BICC1Q9H694 974 aaKnown RBP18■□□□□ 0.47
NEDD4-202ENST00000435532 ARHGEF10LQ9HCE6 1279 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 ANO10Q9NW15 660 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 KDM6BO15054 1643 aa18■□□□□ 0.47
NEDD4-202ENST00000435532 SPDYE3A6NKU9 549 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 NAPAP54920 295 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 IQCEQ6IPM2 695 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 PHACTR3Q96KR7 559 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 SAMD9LQ8IVG5 1584 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 NUCB1Q02818 461 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 USP37Q86T82 979 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 CNNM3Q8NE01 707 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 FERMT2Q96AC1 680 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 FAM89AQ96GI7 184 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 VAMP4O75379 141 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 DNAJC10Q8IXB1 793 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 ZNF408Q9H9D4 720 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 NPC1L1Q9UHC9 1359 aa17.99■□□□□ 0.47
NEDD4-202ENST00000435532 H7C1D1 291 aa17.98■□□□□ 0.47
NEDD4-202ENST00000435532 HCLS1P14317 486 aaPredicted RBP17.98■□□□□ 0.47
NEDD4-202ENST00000435532 CACNA2D4Q7Z3S7 1137 aa17.98■□□□□ 0.47
NEDD4-202ENST00000435532 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
NEDD4-202ENST00000435532 EYA2O00167 538 aa17.98■□□□□ 0.47
NEDD4-202ENST00000435532 FAM114A1Q8IWE2 563 aa17.98■□□□□ 0.47
NEDD4-202ENST00000435532 MPNDQ8N594 471 aa17.98■□□□□ 0.47
NEDD4-202ENST00000435532 NAP1L4Q99733 375 aaKnown RBP17.98■□□□□ 0.47
NEDD4-202ENST00000435532 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
NEDD4-202ENST00000435532 PDE1AP54750 535 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 KIAA1328Q86T90 577 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 NLGN1Q8N2Q7 840 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 TBC1D9Q6ZT07 1266 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 CALML3P27482 149 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 BCS1LQ9Y276 419 aa17.97■□□□□ 0.47
NEDD4-202ENST00000435532 MROH5Q6ZUA9 1318 aa17.96■□□□□ 0.47
NEDD4-202ENST00000435532 BRDTQ58F21 947 aaPredicted RBP17.96■□□□□ 0.47
NEDD4-202ENST00000435532 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
NEDD4-202ENST00000435532 RBM25P49756 843 aaKnown RBP17.96■□□□□ 0.47
NEDD4-202ENST00000435532 KRT27Q7Z3Y8 459 aa17.96■□□□□ 0.47
NEDD4-202ENST00000435532 CCDC174Q6PII3 467 aa17.96■□□□□ 0.47
NEDD4-202ENST00000435532 SPA17Q15506 151 aa17.96■□□□□ 0.47
NEDD4-202ENST00000435532 GJB2P29033 226 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 PPIP5K2O43314 1243 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 IDEP14735 1019 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 CA8P35219 290 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 A1BGP04217 495 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 CNKSR1Q969H4 720 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 CARD10Q9BWT7 1032 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 CFAP100Q494V2 611 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 TSHZ3Q63HK5 1081 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 SPC24Q8NBT2 197 aa17.95■□□□□ 0.46
NEDD4-202ENST00000435532 RBM28Q9NW13 759 aaKnown RBP17.95■□□□□ 0.46
NEDD4-202ENST00000435532 APBB1IPQ7Z5R6 666 aaPredicted RBP17.94■□□□□ 0.46
NEDD4-202ENST00000435532 ZSCAN16Q9H4T2 348 aaPredicted RBP17.94■□□□□ 0.46
NEDD4-202ENST00000435532 RAD50Q92878 1312 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms