RNA–Protein interactions for RNA: ENST00000435367.2

AC025428.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC025428.2, Length 2,672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025428.2-201ENST00000435367 PCDHB3Q9Y5E6 796 aa7.58□□□□□ -1.2
AC025428.2-201ENST00000435367 MINDY4BA8MYZ0 360 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 ERVH48-1M5A8F1 160 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 EIF3JO75822 258 aaKnown RBP7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 DGKZQ13574 1117 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 FRMD6Q96NE9 622 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 SPSB2Q99619 263 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 KDM5BQ9UGL1 1544 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 FOXK2Q01167 660 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 SPTY2D1Q68D10 685 aaPredicted RBP7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 NXPE4Q6UWF7 544 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 TEX2Q8IWB9 1127 aa7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 EAF1Q96JC9 268 aaPredicted RBP7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 CHMP4BQ9H444 224 aaKnown RBP7.57□□□□□ -1.2
AC025428.2-201ENST00000435367 IFT140Q96RY7 1462 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 HSP90AB4PQ58FF6 505 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 SEPT12Q8IYM1 358 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 MYO19Q96H55 970 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 FOXD3Q9UJU5 478 aaPredicted RBP7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 CPNE3O75131 537 aaKnown RBP7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 ZNF687Q8N1G0 1237 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 ST7Q9NRC1 585 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 ROCK1Q13464 1354 aa7.56□□□□□ -1.2
AC025428.2-201ENST00000435367 DDX10Q13206 875 aaKnown RBP7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 CCDC81Q6ZN84 652 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 CCDC74AQ96AQ1 378 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 RAB6BQ9NRW1 208 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 HOMER2Q9NSB8 354 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 WASLO00401 505 aaPredicted RBP7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 NR1I2O75469 434 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 ST13P50502 369 aaKnown RBP7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 ZNF511Q8NB15 262 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 TYW1Q9NV66 732 aaKnown RBP7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 TERF2IPQ9NYB0 399 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 FAM8A1Q9UBU6 413 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 PNMA2Q9UL42 364 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 VPS9D1Q9Y2B5 631 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 KIAA0586Q9BVV6 1533 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 POTEB3A0JP26 581 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 ANP32CO43423 234 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 ERVK-9P63128 1117 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 INTS6LQ5JSJ4 861 aaKnown RBP7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 POTEBQ6S5H4 581 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 LRCH3Q96II8 777 aa7.55□□□□□ -1.2
AC025428.2-201ENST00000435367 KIAA0556O60303 1618 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 FAM9BQ8IZU0 186 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 FAM169BQ8N8A8 192 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 TMPRSS4Q9NRS4 437 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 SH3BP5O60239 455 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 DNMT1P26358 1616 aaKnown RBP7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 C21orf62-AS1Q17RA5 79 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 PLCD4Q9BRC7 762 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 DNAJC25Q9H1X3 360 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 TMEM260Q9NX78 707 aa7.54□□□□□ -1.2
AC025428.2-201ENST00000435367 A6NJY4 79 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 TLL1O43897 1013 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 LRRC41Q15345 812 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 BRDTQ58F21 947 aaPredicted RBP7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 C4orf46Q504U0 113 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 C11orf96Q7Z7L8 435 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 TRPM4Q8TD43 1214 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 C1QTNF2Q9BXJ5 285 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 UBP1Q9NZI7 540 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
AC025428.2-201ENST00000435367 SMAD7O15105 426 aaKnown RBP7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 POU3F3P20264 500 aaPredicted RBP7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 SOX9P48436 509 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 IFT43Q96FT9 208 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 MPHOSPH6Q99547 160 aaKnown RBP7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 FEZ1Q99689 392 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 PARP3Q9Y6F1 533 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 RAPGEF6Q8TEU7 1601 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 CDK13Q14004 1512 aaKnown RBP7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 DENND4BO75064 1496 aaPredicted RBP7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 GNALP38405 381 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 EIF4A3P38919 411 aaKnown RBP7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 SEPT6Q14141 434 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 FBXL19Q6PCT2 694 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 LAPTM4BQ86VI4 370 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 STAG2Q8N3U4 1231 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 CPLX3Q8WVH0 158 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 CEP89Q96ST8 783 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 PRR14Q9BWN1 585 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 CHST12Q9NRB3 414 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 PRKAG3Q9UGI9 489 aa7.52□□□□□ -1.21
AC025428.2-201ENST00000435367 VARS2Q5ST30 1063 aaKnown RBP7.51□□□□□ -1.21
AC025428.2-201ENST00000435367 TREML1Q86YW5 311 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms