RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
NEFM-202ENST00000433454 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
NEFM-202ENST00000433454 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
NEFM-202ENST00000433454 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
NEFM-202ENST00000433454 FLAD1Q8NFF5 587 aa12.86□□□□□ -0.35
NEFM-202ENST00000433454 PDE8BO95263 885 aa12.85□□□□□ -0.35
NEFM-202ENST00000433454 GORABQ5T7V8 394 aa12.85□□□□□ -0.35
NEFM-202ENST00000433454 HAUS7Q99871 368 aa12.85□□□□□ -0.35
NEFM-202ENST00000433454 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
NEFM-202ENST00000433454 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
NEFM-202ENST00000433454 PUM3Q15397 648 aaKnown RBP12.84□□□□□ -0.35
NEFM-202ENST00000433454 CCDC158Q5M9N0 1113 aa12.84□□□□□ -0.35
NEFM-202ENST00000433454 ANKRD18AQ8IVF6 992 aa12.84□□□□□ -0.35
NEFM-202ENST00000433454 XAGE2Q96GT9 111 aa12.84□□□□□ -0.35
NEFM-202ENST00000433454 HIP1O00291 1037 aa12.84□□□□□ -0.35
NEFM-202ENST00000433454 FSD1Q9BTV5 496 aa12.84□□□□□ -0.35
NEFM-202ENST00000433454 ARAP2Q8WZ64 1704 aa12.84□□□□□ -0.35
NEFM-202ENST00000433454 TM4SF1P30408 202 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEFM-202ENST00000433454 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
NEFM-202ENST00000433454 COL4A1P02462 1669 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 MSH5O43196 834 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 ADORA1P30542 326 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 ST5P78524 1137 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 PRR5LQ6MZQ0 368 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 LPIN2Q92539 896 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 USP26Q9BXU7 913 aa12.83□□□□□ -0.36
NEFM-202ENST00000433454 RFX7Q2KHR2 1363 aa12.82□□□□□ -0.36
NEFM-202ENST00000433454 SERPINB2P05120 415 aa12.82□□□□□ -0.36
NEFM-202ENST00000433454 COL23A1Q86Y22 540 aaPredicted RBP12.82□□□□□ -0.36
NEFM-202ENST00000433454 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
NEFM-202ENST00000433454 TAF1P21675 1872 aa12.82□□□□□ -0.36
NEFM-202ENST00000433454 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
NEFM-202ENST00000433454 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
NEFM-202ENST00000433454 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
NEFM-202ENST00000433454 CWC27Q6UX04 472 aaKnown RBP12.82□□□□□ -0.36
NEFM-202ENST00000433454 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
NEFM-202ENST00000433454 HELBQ8NG08 1087 aaPredicted RBP12.82□□□□□ -0.36
NEFM-202ENST00000433454 ANO2Q9NQ90 1003 aa12.82□□□□□ -0.36
NEFM-202ENST00000433454 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
NEFM-202ENST00000433454 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 SGSM2O43147 1006 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 SLC5A1P13866 664 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 FGFR2P21802 821 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
NEFM-202ENST00000433454 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
NEFM-202ENST00000433454 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
NEFM-202ENST00000433454 CHRNDQ07001 517 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 DDR1Q08345 913 aa12.81□□□□□ -0.36
NEFM-202ENST00000433454 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
NEFM-202ENST00000433454 EDC3Q96F86 508 aaKnown RBP12.81□□□□□ -0.36
NEFM-202ENST00000433454 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
NEFM-202ENST00000433454 BAG6P46379 1132 aa12.8□□□□□ -0.36
NEFM-202ENST00000433454 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
NEFM-202ENST00000433454 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
NEFM-202ENST00000433454 NDUFB9Q9Y6M9 179 aa12.8□□□□□ -0.36
NEFM-202ENST00000433454 RAD50Q92878 1312 aa12.8□□□□□ -0.36
NEFM-202ENST00000433454 GOLIM4O00461 696 aa12.8□□□□□ -0.36
NEFM-202ENST00000433454 TAF5LO75529 589 aa12.8□□□□□ -0.36
NEFM-202ENST00000433454 KBTBD3Q8NAB2 608 aa12.8□□□□□ -0.36
NEFM-202ENST00000433454 ZNF512BQ96KM6 892 aaPredicted RBP12.8□□□□□ -0.36
NEFM-202ENST00000433454 IL25Q9H293 177 aa12.8□□□□□ -0.36
NEFM-202ENST00000433454 BECN1Q14457 450 aa12.79□□□□□ -0.36
NEFM-202ENST00000433454 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
NEFM-202ENST00000433454 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
NEFM-202ENST00000433454 MCCP23508 829 aa12.79□□□□□ -0.36
NEFM-202ENST00000433454 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
NEFM-202ENST00000433454 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
NEFM-202ENST00000433454 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
NEFM-202ENST00000433454 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
NEFM-202ENST00000433454 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 CRY2Q49AN0 593 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 CCDC102BQ68D86 513 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 RPGRQ92834 1020 aaKnown RBP12.78□□□□□ -0.36
NEFM-202ENST00000433454 KIF2CQ99661 725 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 NRXN2Q9P2S2 1712 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 UQCRFS1P1P0C7P4 283 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 FKBP4Q02790 459 aaKnown RBP eCLIP12.78□□□□□ -0.36
NEFM-202ENST00000433454 FAM227BQ96M60 508 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
NEFM-202ENST00000433454 ARID4AP29374 1257 aaPredicted RBP12.77□□□□□ -0.37
NEFM-202ENST00000433454 GRAPQ13588 217 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.37
NEFM-202ENST00000433454 AKAP11Q9UKA4 1901 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 A0A0D9SFI3 127 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 MCAMP43121 646 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 PHKA1P46020 1223 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 SCARF1Q14162 830 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.37
NEFM-202ENST00000433454 ANKRD2Q9GZV1 360 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 SNRKQ9NRH2 765 aa12.77□□□□□ -0.37
NEFM-202ENST00000433454 MED23Q9ULK4 1368 aa12.76□□□□□ -0.37
NEFM-202ENST00000433454 SNAP23O00161 211 aa12.76□□□□□ -0.37
NEFM-202ENST00000433454 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 340.3 ms