RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 BCORQ6W2J9 1755 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 USPL1Q5W0Q7 1092 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 AMIGO3Q86WK7 504 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 GOLGA6L6A8MZA4 724 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 ERC2O15083 957 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 NLGN2Q8NFZ4 835 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 KIF18AQ8NI77 898 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 CARMIL3Q8ND23 1372 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 RPAP1Q9BWH6 1393 aaPredicted RBP9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 NRXN2Q9P2S2 1712 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 PXDNLA1KZ92 1463 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 AP5Z1O43299 807 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 TM4SF1P30408 202 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 KRT222Q8N1A0 295 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 IL17RAQ96F46 866 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 CALCOCO1Q9P1Z2 691 aa9.16□□□□□ -0.94
CNKSR3-202ENST00000433165 SMARCA5O60264 1052 aaPredicted RBP9.15□□□□□ -0.94
CNKSR3-202ENST00000433165 TSPYL4Q9UJ04 414 aa9.15□□□□□ -0.94
CNKSR3-202ENST00000433165 WDR33Q9C0J8 1336 aaKnown RBP9.15□□□□□ -0.94
CNKSR3-202ENST00000433165 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.95
CNKSR3-202ENST00000433165 VAMP4O75379 141 aa9.15□□□□□ -0.95
CNKSR3-202ENST00000433165 NEK4P51957 841 aa9.15□□□□□ -0.95
CNKSR3-202ENST00000433165 DZIP3Q86Y13 1208 aaKnown RBP9.15□□□□□ -0.95
CNKSR3-202ENST00000433165 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.95
CNKSR3-202ENST00000433165 SRP68Q9UHB9 627 aaKnown RBP9.15□□□□□ -0.95
CNKSR3-202ENST00000433165 ATP10DQ9P241 1426 aa9.15□□□□□ -0.95
CNKSR3-202ENST00000433165 HOXB7P09629 217 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 PDE6BP35913 854 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 ST5P78524 1137 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 DCTN1Q14203 1278 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 KIF6Q6ZMV9 814 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 SETDB2Q96T68 719 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 TSPYL1Q9H0U9 437 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 PIM2Q9P1W9 311 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 PAXBP1Q9Y5B6 917 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 KIAA1551Q9HCM1 1747 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 NPHP1O15259 732 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 SERPINB2P05120 415 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 CAPN2P17655 700 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 ANAPC15P60006 121 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 EIF4A1P60842 406 aaKnown RBP9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 UBE2HP62256 183 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 NFIXQ14938 502 aa9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 C16orf71Q8IYS4 520 aaPredicted RBP9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
CNKSR3-202ENST00000433165 ARFGEF1Q9Y6D6 1849 aa9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 DLEC1Q9Y238 1755 aa9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 ERVV-1B6SEH8 477 aa9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 GIGYF1O75420 1035 aaPredicted RBP9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 SMIM5Q71RC9 77 aa9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 DDR1Q08345 913 aa9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 ZNF397Q8NF99 534 aaPredicted RBP9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 OTUD7AQ8TE49 926 aaPredicted RBP9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 API5Q9BZZ5 524 aaKnown RBP9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 NYXQ9GZU5 481 aa9.13□□□□□ -0.95
CNKSR3-202ENST00000433165 H0YIN7 160 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 KCNQ3O43525 872 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 A1BGP04217 495 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 PLCD3Q8N3E9 789 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 BRIP1Q9BX63 1249 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 SRCIN1Q9C0H9 1055 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 OSBPL3Q9H4L5 887 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 USP16Q9Y5T5 823 aa9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 AFDNP55196 1824 aaKnown RBP9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 BRCA1P38398 1863 aaKnown RBP9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
CNKSR3-202ENST00000433165 YBX3P16989 372 aaKnown RBP eCLIP9.11□□□□□ -0.953e-6■■■■□ 19.7
CNKSR3-202ENST00000433165 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 SOGA3Q5TF21 947 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 CNBD1Q8NA66 436 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 CCDC112Q8NEF3 446 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 TNNT1P13805 278 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 DPEP1P16444 411 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 PTGS1P23219 599 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 GNAI1P63096 354 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 HSP90AB3PQ58FF7 597 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 SPC24Q8NBT2 197 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 TBC1D2BQ9UPU7 963 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 BCS1LQ9Y276 419 aa9.11□□□□□ -0.95
CNKSR3-202ENST00000433165 NAA30Q147X3 362 aaPredicted RBP9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 KMT5BQ4FZB7 885 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 TPTE2Q6XPS3 522 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 RPAP2Q8IXW5 612 aaPredicted RBP9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 C16orf45Q96MC5 204 aaPredicted RBP9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 IFT57Q9NWB7 429 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 CNPY2Q9Y2B0 182 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 CHL1O00533 1208 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 MCCP23508 829 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 PLCB2Q00722 1185 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 TBC1D9BQ66K14 1250 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 GIMAP6Q6P9H5 292 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 NBPF5PQ86XG9 351 aaPredicted RBP9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 CNKSR1Q969H4 720 aa9.1□□□□□ -0.95
CNKSR3-202ENST00000433165 KIF1BPQ96EK5 621 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms