RNA–Protein interactions for RNA: ENST00000432827.1

LCNL1-202, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-202ENST00000432827 FAM182BQ5T319 152 aa31.39■■■□□ 2.62
LCNL1-202ENST00000432827 VGLL2Q8N8G2 317 aa31.39■■■□□ 2.62
LCNL1-202ENST00000432827 GORABQ5T7V8 394 aa31.38■■■□□ 2.61
LCNL1-202ENST00000432827 MAP4K1Q92918 833 aa31.38■■■□□ 2.61
LCNL1-202ENST00000432827 EDC3Q96F86 508 aaKnown RBP31.38■■■□□ 2.61
LCNL1-202ENST00000432827 SNX14Q9Y5W7 946 aa31.38■■■□□ 2.61
LCNL1-202ENST00000432827 PTH1RQ03431 593 aa31.38■■■□□ 2.61
LCNL1-202ENST00000432827 RTCBQ9Y3I0 505 aaKnown RBP31.38■■■□□ 2.61
LCNL1-202ENST00000432827 KCNQ4P56696 695 aa31.37■■■□□ 2.61
LCNL1-202ENST00000432827 TTC39AQ5SRH9 613 aa31.37■■■□□ 2.61
LCNL1-202ENST00000432827 ZNF512BQ96KM6 892 aaPredicted RBP31.37■■■□□ 2.61
LCNL1-202ENST00000432827 LRRFIP1Q32MZ4 808 aaKnown RBP31.36■■■□□ 2.61
LCNL1-202ENST00000432827 C4BP0C0L5 1744 aa31.36■■■□□ 2.61
LCNL1-202ENST00000432827 GNPATO15228 680 aa31.35■■■□□ 2.61
LCNL1-202ENST00000432827 PDE8BO95263 885 aa31.35■■■□□ 2.61
LCNL1-202ENST00000432827 NECTIN1Q15223 517 aa31.35■■■□□ 2.61
LCNL1-202ENST00000432827 COL24A1Q17RW2 1714 aa31.35■■■□□ 2.61
LCNL1-202ENST00000432827 FAM177BA6PVY3 158 aa31.35■■■□□ 2.61
LCNL1-202ENST00000432827 FAM196AQ6ZSG2 479 aa31.35■■■□□ 2.61
LCNL1-202ENST00000432827 DDX46Q7L014 1031 aaKnown RBP31.35■■■□□ 2.61
LCNL1-202ENST00000432827 ARAP2Q8WZ64 1704 aa31.35■■■□□ 2.61
LCNL1-202ENST00000432827 GOLIM4O00461 696 aa31.34■■■□□ 2.61
LCNL1-202ENST00000432827 TM6SF1Q9BZW5 370 aa31.34■■■□□ 2.61
LCNL1-202ENST00000432827 NYXQ9GZU5 481 aa31.34■■■□□ 2.61
LCNL1-202ENST00000432827 BCL2L12Q9HB09 334 aa31.34■■■□□ 2.61
LCNL1-202ENST00000432827 CWC22Q9HCG8 908 aaKnown RBP31.34■■■□□ 2.61
LCNL1-202ENST00000432827 HELLSQ9NRZ9 838 aa31.34■■■□□ 2.61
LCNL1-202ENST00000432827 ZPR1O75312 459 aa31.33■■■□□ 2.61
LCNL1-202ENST00000432827 ADORA1P30542 326 aa31.33■■■□□ 2.61
LCNL1-202ENST00000432827 MCMDC2Q4G0Z9 681 aa31.33■■■□□ 2.61
LCNL1-202ENST00000432827 SLC10A5Q5PT55 438 aa31.33■■■□□ 2.61
LCNL1-202ENST00000432827 RBM8AQ9Y5S9 174 aaKnown RBP31.33■■■□□ 2.61
LCNL1-202ENST00000432827 ZKSCAN1P17029 563 aaPredicted RBP31.32■■■□□ 2.6
LCNL1-202ENST00000432827 MPHOSPH8Q99549 860 aa31.32■■■□□ 2.6
LCNL1-202ENST00000432827 SF3B3Q15393 1217 aaKnown RBP31.31■■■□□ 2.6
LCNL1-202ENST00000432827 PUM3Q15397 648 aaKnown RBP31.31■■■□□ 2.6
LCNL1-202ENST00000432827 RNF20Q5VTR2 975 aa31.31■■■□□ 2.6
LCNL1-202ENST00000432827 RASEFQ8IZ41 740 aa31.31■■■□□ 2.6
LCNL1-202ENST00000432827 HMGB2P26583 209 aaKnown RBP31.31■■■□□ 2.6
LCNL1-202ENST00000432827 IGHMBP2P38935 993 aaKnown RBP31.31■■■□□ 2.6
LCNL1-202ENST00000432827 USPL1Q5W0Q7 1092 aa31.31■■■□□ 2.6
LCNL1-202ENST00000432827 LPIN2Q92539 896 aa31.31■■■□□ 2.6
LCNL1-202ENST00000432827 NDUFB9Q9Y6M9 179 aa31.31■■■□□ 2.6
LCNL1-202ENST00000432827 BRWD3Q6RI45 1802 aa31.3■■■□□ 2.6
LCNL1-202ENST00000432827 TAF5LO75529 589 aa31.3■■■□□ 2.6
LCNL1-202ENST00000432827 SSFA2P28290 1259 aa31.3■■■□□ 2.6
LCNL1-202ENST00000432827 KCNJ4P48050 445 aa31.3■■■□□ 2.6
LCNL1-202ENST00000432827 PRPF40BQ6NWY9 871 aaKnown RBP31.3■■■□□ 2.6
LCNL1-202ENST00000432827 HMG20BQ9P0W2 317 aa31.3■■■□□ 2.6
LCNL1-202ENST00000432827 FRAT2O75474 233 aaPredicted RBP31.29■■■□□ 2.6
LCNL1-202ENST00000432827 FGFR2P21802 821 aa31.29■■■□□ 2.6
LCNL1-202ENST00000432827 TBC1D9BQ66K14 1250 aa31.29■■■□□ 2.6
LCNL1-202ENST00000432827 KRT27Q7Z3Y8 459 aa31.29■■■□□ 2.6
LCNL1-202ENST00000432827 CDC5LQ99459 802 aaKnown RBP31.29■■■□□ 2.6
LCNL1-202ENST00000432827 ADRA2BP18089 450 aa31.28■■■□□ 2.6
LCNL1-202ENST00000432827 CREB3L3Q68CJ9 461 aa31.28■■■□□ 2.6
LCNL1-202ENST00000432827 ZNF589Q86UQ0 364 aaPredicted RBP31.28■■■□□ 2.6
LCNL1-202ENST00000432827 SETDB2Q96T68 719 aa31.28■■■□□ 2.6
LCNL1-202ENST00000432827 ZFYP08048 801 aaPredicted RBP31.27■■■□□ 2.6
LCNL1-202ENST00000432827 ERFEQ4G0M1 354 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 ZMYM1Q5SVZ6 1142 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 TMX3Q96JJ7 454 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 C4AP0C0L4 1744 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 RNF113AO15541 343 aaKnown RBP31.27■■■□□ 2.6
LCNL1-202ENST00000432827 UQCRFS1P1P0C7P4 283 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 CUL4AQ13619 759 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 TSGA10IPQ3SY00 556 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 SLC27A3Q5K4L6 730 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 ARHGEF1Q92888 912 aaKnown RBP31.27■■■□□ 2.6
LCNL1-202ENST00000432827 UPF3BQ9BZI7 483 aaKnown RBP31.27■■■□□ 2.6
LCNL1-202ENST00000432827 SEC31BQ9NQW1 1179 aa31.27■■■□□ 2.6
LCNL1-202ENST00000432827 SLC5A1P13866 664 aa31.26■■■□□ 2.59
LCNL1-202ENST00000432827 RAB3GAP1Q15042 981 aa31.26■■■□□ 2.59
LCNL1-202ENST00000432827 TTC14Q96N46 770 aa31.26■■■□□ 2.59
LCNL1-202ENST00000432827 U3KPZ7 1027 aaPredicted RBP31.26■■■□□ 2.59
LCNL1-202ENST00000432827 SLC27A2O14975 620 aa31.25■■■□□ 2.59
LCNL1-202ENST00000432827 PSMA5P28066 241 aa31.25■■■□□ 2.59
LCNL1-202ENST00000432827 TRAPPC3LQ5T215 181 aa31.25■■■□□ 2.59
LCNL1-202ENST00000432827 INTS4Q96HW7 963 aaKnown RBP31.25■■■□□ 2.59
LCNL1-202ENST00000432827 ZSWIM6Q9HCJ5 1215 aa31.25■■■□□ 2.59
LCNL1-202ENST00000432827 CASZ1Q86V15 1759 aa31.25■■■□□ 2.59
LCNL1-202ENST00000432827 FKBP4Q02790 459 aaKnown RBP eCLIP31.24■■■□□ 2.59
LCNL1-202ENST00000432827 ZNF772Q68DY9 489 aaPredicted RBP31.24■■■□□ 2.59
LCNL1-202ENST00000432827 SRP68Q9UHB9 627 aaKnown RBP31.24■■■□□ 2.59
LCNL1-202ENST00000432827 AKAP11Q9UKA4 1901 aa31.24■■■□□ 2.59
LCNL1-202ENST00000432827 ARID4AP29374 1257 aaPredicted RBP31.24■■■□□ 2.59
LCNL1-202ENST00000432827 FOXD4L1Q9NU39 408 aa31.24■■■□□ 2.59
LCNL1-202ENST00000432827 GTF2E1P29083 439 aaPredicted RBP31.23■■■□□ 2.59
LCNL1-202ENST00000432827 TTF1Q15361 905 aaPredicted RBP31.23■■■□□ 2.59
LCNL1-202ENST00000432827 RFC4P35249 363 aa31.22■■■□□ 2.59
LCNL1-202ENST00000432827 NUCB2P80303 420 aa31.22■■■□□ 2.59
LCNL1-202ENST00000432827 VPS53Q5VIR6 699 aa31.22■■■□□ 2.59
LCNL1-202ENST00000432827 CYP46A1Q9Y6A2 500 aa31.22■■■□□ 2.59
LCNL1-202ENST00000432827 RPAP1Q9BWH6 1393 aaPredicted RBP31.22■■■□□ 2.59
LCNL1-202ENST00000432827 MYH7P12883 1935 aa31.22■■■□□ 2.59
LCNL1-202ENST00000432827 CASTP20810 708 aaKnown RBP31.21■■■□□ 2.59
LCNL1-202ENST00000432827 KRT32Q14532 448 aa31.21■■■□□ 2.59
LCNL1-202ENST00000432827 TPTE2Q6XPS3 522 aa31.21■■■□□ 2.59
LCNL1-202ENST00000432827 BICDL1Q6ZP65 573 aa31.21■■■□□ 2.59
LCNL1-202ENST00000432827 JAKMIP1Q96N16 626 aaKnown RBP31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms