RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 RFX7Q2KHR2 1363 aa15.42■□□□□ 0.06
DDX56-204ENST00000431640 GOLGA6L3A6NEY3 463 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 CIAO1O76071 339 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 NLRP10Q86W26 655 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 CCDC125Q86Z20 511 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 MAP4K1Q92918 833 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 PDGFDQ9GZP0 370 aaPredicted RBP15.41■□□□□ 0.06
DDX56-204ENST00000431640 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
DDX56-204ENST00000431640 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
DDX56-204ENST00000431640 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 ADRA2BP18089 450 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 PSMA5P28066 241 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
DDX56-204ENST00000431640 NECTIN1Q15223 517 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 SLC15A2Q16348 729 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 SYNE4Q8N205 404 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 UPF3BQ9BZI7 483 aaKnown RBP15.41■□□□□ 0.06
DDX56-204ENST00000431640 TFCP2L1Q9NZI6 479 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 DBNLQ9UJU6 430 aaKnown RBP15.41■□□□□ 0.06
DDX56-204ENST00000431640 LIMCH1Q9UPQ0 1083 aa15.41■□□□□ 0.06
DDX56-204ENST00000431640 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
DDX56-204ENST00000431640 EYA2O00167 538 aa15.4■□□□□ 0.06
DDX56-204ENST00000431640 GYS1P13807 737 aa15.4■□□□□ 0.06
DDX56-204ENST00000431640 TRAPPC3LQ5T215 181 aa15.4■□□□□ 0.06
DDX56-204ENST00000431640 VPS53Q5VIR6 699 aa15.4■□□□□ 0.06
DDX56-204ENST00000431640 ZSCAN31Q96LW9 406 aaPredicted RBP15.4■□□□□ 0.06
DDX56-204ENST00000431640 TTC14Q96N46 770 aa15.4■□□□□ 0.06
DDX56-204ENST00000431640 PLA2G12BQ9BX93 195 aa15.4■□□□□ 0.06
DDX56-204ENST00000431640 COL4A1P02462 1669 aa15.39■□□□□ 0.05
DDX56-204ENST00000431640 PCCAP05165 728 aaPredicted RBP15.39■□□□□ 0.05
DDX56-204ENST00000431640 KCNJ4P48050 445 aa15.39■□□□□ 0.05
DDX56-204ENST00000431640 PTH1RQ03431 593 aa15.39■□□□□ 0.05
DDX56-204ENST00000431640 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
DDX56-204ENST00000431640 HAUS7Q99871 368 aa15.39■□□□□ 0.05
DDX56-204ENST00000431640 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
DDX56-204ENST00000431640 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.39■□□□□ 0.05
DDX56-204ENST00000431640 CYP46A1Q9Y6A2 500 aa15.39■□□□□ 0.05
DDX56-204ENST00000431640 FSD2A1L4K1 749 aa15.38■□□□□ 0.05
DDX56-204ENST00000431640 RFC4P35249 363 aa15.38■□□□□ 0.05
DDX56-204ENST00000431640 KLHL40Q2TBA0 621 aa15.38■□□□□ 0.05
DDX56-204ENST00000431640 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
DDX56-204ENST00000431640 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
DDX56-204ENST00000431640 ATG9AQ7Z3C6 839 aa15.38■□□□□ 0.05
DDX56-204ENST00000431640 GZF1Q9H116 711 aaPredicted RBP15.38■□□□□ 0.05
DDX56-204ENST00000431640 NRXN2Q9P2S2 1712 aa15.38■□□□□ 0.05
DDX56-204ENST00000431640 NTSR2O95665 410 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 CASTP20810 708 aaKnown RBP15.37■□□□□ 0.05
DDX56-204ENST00000431640 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 MCTP1Q6DN14 999 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
DDX56-204ENST00000431640 FAM227BQ96M60 508 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 DBNDD2Q9BQY9 259 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 PDRG1Q9NUG6 133 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 HMG20BQ9P0W2 317 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
DDX56-204ENST00000431640 AKAP2Q9Y2D5 859 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 RBM8AQ9Y5S9 174 aaKnown RBP15.37■□□□□ 0.05
DDX56-204ENST00000431640 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
DDX56-204ENST00000431640 BRD1O95696 1058 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
DDX56-204ENST00000431640 AK2P54819 239 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 TSGA10IPQ3SY00 556 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 CREB3L3Q68CJ9 461 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 CLEC4GQ6UXB4 293 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 BICDL1Q6ZP65 573 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 RUFY3Q7L099 469 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.36■□□□□ 0.05
DDX56-204ENST00000431640 ALDH8A1Q9H2A2 487 aaPredicted RBP15.36■□□□□ 0.05
DDX56-204ENST00000431640 SH2B1Q9NRF2 756 aaPredicted RBP15.36■□□□□ 0.05
DDX56-204ENST00000431640 ZDHHC9Q9Y397 364 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 DDX49Q9Y6V7 483 aaKnown RBP15.36■□□□□ 0.05
DDX56-204ENST00000431640 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 RGL2O15211 777 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 ZPR1O75312 459 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 MRE11P49959 708 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 NFIXQ14938 502 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
DDX56-204ENST00000431640 NEUROD6Q96NK8 337 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 STK32BQ9NY57 414 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 CEP126Q9P2H0 1117 aa15.36■□□□□ 0.05
DDX56-204ENST00000431640 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 WDR33Q9C0J8 1336 aaKnown RBP15.35■□□□□ 0.05
DDX56-204ENST00000431640 MYH3P11055 1940 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 FAM177BA6PVY3 158 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 CSF1RP07333 972 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 DDR1Q08345 913 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 KRT32Q14532 448 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 LRRFIP1Q32MZ4 808 aaKnown RBP15.35■□□□□ 0.05
DDX56-204ENST00000431640 NOL8Q76FK4 1167 aaKnown RBP15.35■□□□□ 0.05
DDX56-204ENST00000431640 KBTBD3Q8NAB2 608 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
DDX56-204ENST00000431640 CARMIL3Q8ND23 1372 aa15.34■□□□□ 0.05
DDX56-204ENST00000431640 A0A0D9SFI3 127 aa15.34■□□□□ 0.05
DDX56-204ENST00000431640 SLC27A2O14975 620 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms