RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 C9orf131Q5VYM1 1079 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 NXPE4Q6UWF7 544 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 ERMP1Q7Z2K6 904 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 NANOS1Q8WY41 292 aaKnown RBP5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 TCF12Q99081 682 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 MDFIQ99750 246 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 SRA1Q9HD15 236 aaKnown RBP5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 ABCB6Q9NP58 842 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 LATS2Q9NRM7 1088 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 NLRP2Q9NX02 1062 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 GMPR2Q9P2T1 348 aaKnown RBP5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 EDN3P14138 238 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 NFKB1P19838 968 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 NRLP54845 237 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 MEI1Q5TIA1 1274 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 TTC39BQ5VTQ0 682 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 RIPOR1Q6ZS17 1223 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 CEP120Q8N960 986 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 SLC43A3Q8NBI5 491 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 TRPM4Q8TD43 1214 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 ABHD17AQ96GS6 310 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 KANSL3Q9P2N6 904 aa5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 DDX41Q9UJV9 622 aaKnown RBP5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P27-201ENST00000431429 ZBTB42B2RXF5 422 aa5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 RARAP10276 462 aa5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 SNRPBP14678 240 aaKnown RBP5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 FGFR3P22607 806 aa5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 RACK1P63244 317 aaKnown RBP5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 GPLD1P80108 840 aa5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 TAF1CQ15572 869 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 CCNJLQ8IV13 435 aa5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 SREK1Q8WXA9 508 aaKnown RBP5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 GMLQ99445 158 aa5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 NOC4LQ9BVI4 516 aaKnown RBP5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 BHLHE41Q9C0J9 482 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 TRAK1Q9UPV9 953 aa5.09□□□□□ -1.59
HMGB1P27-201ENST00000431429 LOC105371045A0A1W2PR82 267 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 C2CD2LO14523 706 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 PPFIA3O75145 1194 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 ACPPP15309 386 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 CD33P20138 364 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 ITPKAP23677 461 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 GSTT1P30711 240 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 PLAURQ03405 335 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 DHX32Q7L7V1 743 aaKnown RBP5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 KRT25Q7Z3Z0 450 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 GTPBP3Q969Y2 492 aaKnown RBP5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 ZKSCAN3Q9BRR0 538 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 PPM1HQ9ULR3 514 aa5.08□□□□□ -1.6
HMGB1P27-201ENST00000431429 TMEM238LA0A1B0GVL6 79 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 PHF20L1A8MW92 1017 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 GADD45BO75293 160 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 PSAPP07602 524 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 XRCC5P13010 732 aaKnown RBP5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 CTBSQ01459 385 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 HYAL2Q12891 473 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 ZNF394Q53GI3 561 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 TMEM102Q8N9M5 508 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 TNFRSF25Q93038 417 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 RSRP1Q9BUV0 290 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 AVENQ9NQS1 362 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 KCNQ5Q9NR82 932 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 PHF24Q9UPV7 400 aa5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P27-201ENST00000431429 SIN3BO75182 1162 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 GJA8P48165 433 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 GAS6Q14393 721 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 ZNF468Q5VIY5 522 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 HS2ST1Q7LGA3 356 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 RAB44Q7Z6P3 723 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 BHMTQ93088 406 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 NXPE3Q969Y0 559 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 DRC1Q96MC2 740 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 OSMRQ99650 979 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 IRX2Q9BZI1 471 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 EHD4Q9H223 541 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 ACBD3Q9H3P7 528 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 LIN7BQ9HAP6 207 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 KLF15Q9UIH9 416 aa5.06□□□□□ -1.6
HMGB1P27-201ENST00000431429 GRIA4P48058 902 aa5.05□□□□□ -1.6
HMGB1P27-201ENST00000431429 USP48Q86UV5 1035 aa5.05□□□□□ -1.6
HMGB1P27-201ENST00000431429 ZNF654Q8IZM8 581 aa5.05□□□□□ -1.6
HMGB1P27-201ENST00000431429 PNMA5Q96PV4 448 aa5.05□□□□□ -1.6
HMGB1P27-201ENST00000431429 HHIPQ96QV1 700 aa5.05□□□□□ -1.6
HMGB1P27-201ENST00000431429 OXCT2Q9BYC2 517 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P27-201ENST00000431429 PCDHGB7Q9Y5F8 929 aa5.05□□□□□ -1.6
HMGB1P27-201ENST00000431429 LOC102724428A0A0B4J2F2 783 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 ADARB2-AS1A8MUL3 147 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 VSIG8P0DPA2 414 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 TNNI2P48788 182 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 SIK1P57059 783 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 SF3A1Q15459 793 aaKnown RBP5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 RPS26P11Q5JNZ5 115 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 ADAMTSL4Q6UY14 1074 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 RASGRP4Q8TDF6 673 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 RHOVQ96L33 236 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 PBX4Q9BYU1 374 aa5.04□□□□□ -1.6
HMGB1P27-201ENST00000431429 ZNF576Q9H609 170 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms