RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 XPOTO43592 962 aaKnown RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 FMNL1O95466 1100 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 PYGLP06737 847 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 GEMIN4P57678 1058 aaKnown RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 ADCY2Q08462 1091 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 FERMT3Q86UX7 667 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 ARMC2Q8NEN0 867 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 GFM2Q969S9 779 aaKnown RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 IER2Q9BTL4 223 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 TTC12Q9H892 705 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 HPS4Q9NQG7 708 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 IFT57Q9NWB7 429 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 KIAA1468Q9P260 1216 aa6.18□□□□□ -1.42
PTPN4-203ENST00000430976 HOOK1Q9UJC3 728 aaKnown RBP6.18□□□□□ -1.42
PTPN4-203ENST00000430976 TGFB3P10600 412 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 ATP2B1P20020 1258 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 C14orf80Q86SX3 495 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 CEP63Q96MT8 703 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 CAPN10Q9HC96 672 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 HELLSQ9NRZ9 838 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 KCTD5Q9NXV2 234 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 ZNF652Q9Y2D9 606 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-203ENST00000430976 SNX5Q9Y5X3 404 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 SYNRGQ9UMZ2 1314 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 GOLGA6L10A0A0M3HER8 536 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 ANKRD18BA2A2Z9 1011 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 H0YC42 278 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 MTA2O94776 668 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 CAPN12Q6ZSI9 719 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 CLMNQ96JQ2 1002 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 PRKAG2Q9UGJ0 569 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 TRIM66O15016 1216 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 RASA4O43374 803 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 TIPRLO75663 272 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 NFX1Q12986 1120 aaKnown RBP6.17□□□□□ -1.42
PTPN4-203ENST00000430976 SNX1Q13596 522 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 ZRSR1Q15695 479 aaKnown RBP6.17□□□□□ -1.42
PTPN4-203ENST00000430976 LEKR1Q6ZMV7 388 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 SDCCAG8Q86SQ7 713 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-203ENST00000430976 PPP1R14CQ8TAE6 165 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPN4-203ENST00000430976 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.17□□□□□ -1.42
PTPN4-203ENST00000430976 MAFFQ9ULX9 164 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 LRRFIP2Q9Y608 721 aaKnown RBP6.17□□□□□ -1.42
PTPN4-203ENST00000430976 SIX5Q8N196 739 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 NLGN1Q8N2Q7 840 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 SLC45A1Q9Y2W3 748 aa6.17□□□□□ -1.42
PTPN4-203ENST00000430976 CYP11B2P19099 503 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 RASGRP2Q7LDG7 609 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 WDR63Q8IWG1 891 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 ATP11CQ8NB49 1132 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 ZBTB10Q96DT7 871 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 FANCFQ9NPI8 374 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 JADE2Q9NQC1 790 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 ADCY1Q08828 1119 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 NAA25Q14CX7 972 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 LRRC23Q53EV4 343 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-203ENST00000430976 SAMD3Q8N6K7 520 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 KIAA1958Q8N8K9 716 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 CCDC26Q8TAB7 109 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 TBC1D22AQ8WUA7 517 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 KCNB2Q92953 911 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 MKL1Q969V6 931 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 BAG1Q99933 345 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-203ENST00000430976 TRIM7Q9C029 511 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 SEPT11Q9NVA2 429 aaKnown RBP6.16□□□□□ -1.42
PTPN4-203ENST00000430976 SYNDIG1LA6NDD5 238 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 MYO1CO00159 1063 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 PPP1R12BO60237 982 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-203ENST00000430976 MYCP01106 439 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-203ENST00000430976 SLC4A1P02730 911 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 MPP3Q13368 585 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 TNIP1Q15025 636 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 SKIDA1Q1XH10 827 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 WASHC4Q2M389 1173 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 HSP90AA4PQ58FG1 418 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 MYRIPQ8NFW9 859 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 PANK3Q9H999 370 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPN4-203ENST00000430976 SCINQ9Y6U3 715 aa6.16□□□□□ -1.42
PTPN4-203ENST00000430976 ATP6V1G1O75348 118 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 KATNA1O75449 491 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 RLBP1P12271 317 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 HALP42357 657 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 HSD17B7P56937 341 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 IQCB1Q15051 598 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 C10orf76Q5T2E6 689 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 PEX5LQ8IYB4 626 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 KIF18AQ8NI77 898 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 TMC2Q8TDI7 906 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 PPP1R14BQ96C90 147 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 SCYL1Q96KG9 808 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 ZNF512BQ96KM6 892 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-203ENST00000430976 CEP295NLQ96MC4 621 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 ZNF304Q9HCX3 659 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 E2F6O75461 281 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 SNUPNO95149 360 aaKnown RBP6.15□□□□□ -1.42
PTPN4-203ENST00000430976 PPP4CP60510 307 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 TMED1Q13445 227 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms