RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
HOXC4-202ENST00000430889 LAMB2P55268 1798 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 ABCC12Q96J65 1359 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 STX6O43752 255 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 MBD3O95983 291 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 IL6STP40189 918 aaPredicted RBP16.69■□□□□ 0.26
HOXC4-202ENST00000430889 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 CEP126Q9P2H0 1117 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 SMC3Q9UQE7 1217 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
HOXC4-202ENST00000430889 GOLIM4O00461 696 aa16.68■□□□□ 0.26
HOXC4-202ENST00000430889 KRT32Q14532 448 aa16.68■□□□□ 0.26
HOXC4-202ENST00000430889 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
HOXC4-202ENST00000430889 ARXQ96QS3 562 aa16.68■□□□□ 0.26
HOXC4-202ENST00000430889 TMEM63CQ9P1W3 806 aa16.68■□□□□ 0.26
HOXC4-202ENST00000430889 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
HOXC4-202ENST00000430889 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
HOXC4-202ENST00000430889 GJB2P29033 226 aa16.67■□□□□ 0.26
HOXC4-202ENST00000430889 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
HOXC4-202ENST00000430889 ANKRD1Q15327 319 aa16.67■□□□□ 0.26
HOXC4-202ENST00000430889 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
HOXC4-202ENST00000430889 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
HOXC4-202ENST00000430889 MTMR6Q9Y217 621 aa16.67■□□□□ 0.26
HOXC4-202ENST00000430889 RIPOR2Q9Y4F9 1068 aa16.67■□□□□ 0.26
HOXC4-202ENST00000430889 F13A1P00488 732 aa16.66■□□□□ 0.26
HOXC4-202ENST00000430889 CYP21A2P08686 494 aa16.66■□□□□ 0.26
HOXC4-202ENST00000430889 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
HOXC4-202ENST00000430889 ADORA1P30542 326 aa16.66■□□□□ 0.26
HOXC4-202ENST00000430889 ZNF34Q8IZ26 560 aa16.66■□□□□ 0.26
HOXC4-202ENST00000430889 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
HOXC4-202ENST00000430889 AKAP2Q9Y2D5 859 aa16.66■□□□□ 0.26
HOXC4-202ENST00000430889 BCORQ6W2J9 1755 aa16.66■□□□□ 0.26
HOXC4-202ENST00000430889 UBN2Q6ZU65 1347 aa16.66■□□□□ 0.26
HOXC4-202ENST00000430889 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
HOXC4-202ENST00000430889 CTSWP56202 376 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 IFIT5Q13325 482 aaKnown RBP16.65■□□□□ 0.26
HOXC4-202ENST00000430889 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 XAGE2Q96GT9 111 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 MAST3O60307 1309 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 SPATA31A5Q5VU36 1347 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 SPATA31A7Q8IWB4 1347 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 RNF113AO15541 343 aaKnown RBP16.65■□□□□ 0.26
HOXC4-202ENST00000430889 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 NECAB1Q8N987 351 aa16.65■□□□□ 0.26
HOXC4-202ENST00000430889 MYO5AQ9Y4I1 1855 aaKnown RBP16.64■□□□□ 0.25
HOXC4-202ENST00000430889 GPTP24298 496 aa16.64■□□□□ 0.25
HOXC4-202ENST00000430889 INTS5Q6P9B9 1019 aaKnown RBP16.64■□□□□ 0.25
HOXC4-202ENST00000430889 TCEANC2Q96MN5 208 aa16.64■□□□□ 0.25
HOXC4-202ENST00000430889 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
HOXC4-202ENST00000430889 GREM2Q9H772 168 aa16.64■□□□□ 0.25
HOXC4-202ENST00000430889 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
HOXC4-202ENST00000430889 DZIP3Q86Y13 1208 aaKnown RBP16.63■□□□□ 0.25
HOXC4-202ENST00000430889 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
HOXC4-202ENST00000430889 CCDC9Q9Y3X0 531 aaKnown RBP16.63■□□□□ 0.25
HOXC4-202ENST00000430889 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
HOXC4-202ENST00000430889 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
HOXC4-202ENST00000430889 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
HOXC4-202ENST00000430889 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
HOXC4-202ENST00000430889 ITGA6P23229 1130 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 DDB1Q16531 1140 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
HOXC4-202ENST00000430889 M0R2C6 588 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 FOXP2O15409 715 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 PDE8AO60658 829 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
HOXC4-202ENST00000430889 SCARF1Q14162 830 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 AK7Q96M32 723 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
HOXC4-202ENST00000430889 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
HOXC4-202ENST00000430889 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
HOXC4-202ENST00000430889 LRSAM1Q6UWE0 723 aa16.61■□□□□ 0.25
HOXC4-202ENST00000430889 OSBP2Q969R2 916 aa16.61■□□□□ 0.25
HOXC4-202ENST00000430889 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
HOXC4-202ENST00000430889 GDPD2Q9HCC8 539 aa16.61■□□□□ 0.25
HOXC4-202ENST00000430889 CCDC87Q9NVE4 849 aa16.61■□□□□ 0.25
HOXC4-202ENST00000430889 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
HOXC4-202ENST00000430889 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
HOXC4-202ENST00000430889 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 ANKRD18BA2A2Z9 1011 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 ADAMTS2O95450 1211 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 EXOSC10Q01780 885 aaKnown RBP16.6■□□□□ 0.25
HOXC4-202ENST00000430889 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 PPP1R9BQ96SB3 815 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 RBSNQ9H1K0 784 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 TRMT112Q9UI30 125 aaKnown RBP16.6■□□□□ 0.25
HOXC4-202ENST00000430889 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 ATP6V1DQ9Y5K8 247 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 ATRNO75882 1429 aa16.6■□□□□ 0.25
HOXC4-202ENST00000430889 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms