RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CAVIN4Q5BKX8 364 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 MPHOSPH6Q99547 160 aaKnown RBP18.63■□□□□ 0.57
RIF1-204ENST00000430328 LCA5Q86VQ0 697 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 CCDC65Q8IXS2 484 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 NDUFAB1O14561 156 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 GJC1P36383 396 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 CAPZA3Q96KX2 299 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 TNNC1P63316 161 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 SPECC1L-ADORA2AF8WAN1 911 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 RASSF2P50749 326 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 RAB11FIP4Q86YS3 637 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 CCDC26Q8TAB7 109 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 HAUS8Q9BT25 410 aa18.62■□□□□ 0.57
RIF1-204ENST00000430328 PFDN1O60925 122 aa18.61■□□□□ 0.57
RIF1-204ENST00000430328 ATP6V1E1P36543 226 aa18.61■□□□□ 0.57
RIF1-204ENST00000430328 CSRNP2Q9H175 543 aa18.61■□□□□ 0.57
RIF1-204ENST00000430328 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
RIF1-204ENST00000430328 NLRP6P59044 892 aa18.61■□□□□ 0.57
RIF1-204ENST00000430328 PRPF40BQ6NWY9 871 aaKnown RBP18.61■□□□□ 0.57
RIF1-204ENST00000430328 SCAPERQ9BY12 1400 aa18.61■□□□□ 0.57
RIF1-204ENST00000430328 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 ZC3H6P61129 1189 aaKnown RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 TMEM57Q8N5G2 664 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 MICAL1Q8TDZ2 1067 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 HPDP32754 393 aaPredicted RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 PDCD2Q16342 344 aaPredicted RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 SYKP43405 635 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 MAP3K21Q5TCX8 1036 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 EIF2AQ9BY44 585 aaKnown RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 TATP17735 454 aaPredicted RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 METTL24Q5JXM2 366 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 SPAG1Q07617 926 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 TRMT1LQ7Z2T5 733 aaKnown RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
RIF1-204ENST00000430328 FAF1Q9UNN5 650 aaPredicted RBP18.6■□□□□ 0.57
RIF1-204ENST00000430328 OPHN1O60890 802 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 STAT6P42226 847 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 ITIH3Q06033 890 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 ERMNQ8TAM6 284 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 PSPC1Q8WXF1 523 aaKnown RBP18.59■□□□□ 0.57
RIF1-204ENST00000430328 IL1RAPL2Q9NP60 686 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 SYF2O95926 243 aaKnown RBP18.59■□□□□ 0.57
RIF1-204ENST00000430328 SYT1P21579 422 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
RIF1-204ENST00000430328 MUM1Q2TAK8 710 aa18.59■□□□□ 0.57
RIF1-204ENST00000430328 RHOXF2BP0C7M4 288 aa18.58■□□□□ 0.57
RIF1-204ENST00000430328 RHOXF2Q9BQY4 288 aa18.58■□□□□ 0.57
RIF1-204ENST00000430328 MAP3K12Q12852 859 aa18.58■□□□□ 0.57
RIF1-204ENST00000430328 RBBP5Q15291 538 aaKnown RBP18.58■□□□□ 0.57
RIF1-204ENST00000430328 ZNF428Q96B54 188 aa18.58■□□□□ 0.57
RIF1-204ENST00000430328 ARID5AQ03989 594 aa18.58■□□□□ 0.57
RIF1-204ENST00000430328 ZSCAN16Q9H4T2 348 aaPredicted RBP18.58■□□□□ 0.57
RIF1-204ENST00000430328 E7EVH7 732 aa18.58■□□□□ 0.56
RIF1-204ENST00000430328 BAG1Q99933 345 aaPredicted RBP18.58■□□□□ 0.56
RIF1-204ENST00000430328 CCT2P78371 535 aaKnown RBP18.58■□□□□ 0.56
RIF1-204ENST00000430328 SLC4A8Q2Y0W8 1093 aa18.58■□□□□ 0.56
RIF1-204ENST00000430328 GPRASP1Q5JY77 1395 aa18.58■□□□□ 0.56
RIF1-204ENST00000430328 VSIG1Q86XK7 387 aa18.58■□□□□ 0.56
RIF1-204ENST00000430328 SLF2Q8IX21 1173 aa18.58■□□□□ 0.56
RIF1-204ENST00000430328 CCDC42Q96M95 316 aa18.58■□□□□ 0.56
RIF1-204ENST00000430328 SRGAP1Q7Z6B7 1085 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 Q9H521 79 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 TFIP11Q9UBB9 837 aaKnown RBP18.57■□□□□ 0.56
RIF1-204ENST00000430328 FAN1Q9Y2M0 1017 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 SMAP1Q8IYB5 467 aaPredicted RBP18.57■□□□□ 0.56
RIF1-204ENST00000430328 CDCA7LQ96GN5 454 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 MX2P20592 715 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 CCDC122Q5T0U0 273 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 CCDC117Q8IWD4 279 aaPredicted RBP18.57■□□□□ 0.56
RIF1-204ENST00000430328 RASA3Q14644 834 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 BANK1Q8NDB2 785 aa18.57■□□□□ 0.56
RIF1-204ENST00000430328 PSMA7O14818 248 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 HDAC9Q9UKV0 1011 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 UTP11Q9Y3A2 253 aaKnown RBP18.56■□□□□ 0.56
RIF1-204ENST00000430328 PANK2Q9BZ23 570 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 AFG3L2Q9Y4W6 797 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 TPX2Q9ULW0 747 aaKnown RBP18.56■□□□□ 0.56
RIF1-204ENST00000430328 I3L4J1 428 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 HCLS1P14317 486 aaPredicted RBP18.56■□□□□ 0.56
RIF1-204ENST00000430328 CLCN1P35523 988 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 ZSCAN23Q3MJ62 389 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 SSFA2P28290 1259 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 ANO6Q4KMQ2 910 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 SEL1L2Q5TEA6 688 aa18.56■□□□□ 0.56
RIF1-204ENST00000430328 NBPF7P0C2Y1 421 aaPredicted RBP18.55■□□□□ 0.56
RIF1-204ENST00000430328 IRX5P78411 483 aaPredicted RBP18.55■□□□□ 0.56
RIF1-204ENST00000430328 AGTPBP1Q9UPW5 1226 aa18.55■□□□□ 0.56
RIF1-204ENST00000430328 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
RIF1-204ENST00000430328 GJB2P29033 226 aa18.55■□□□□ 0.56
RIF1-204ENST00000430328 RRAGBQ5VZM2 374 aa18.55■□□□□ 0.56
RIF1-204ENST00000430328 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
RIF1-204ENST00000430328 TRIM4Q9C037 500 aa18.55■□□□□ 0.56
RIF1-204ENST00000430328 PALM3A6NDB9 673 aaPredicted RBP18.55■□□□□ 0.56
RIF1-204ENST00000430328 ACTN4O43707 911 aaKnown RBP18.55■□□□□ 0.56
RIF1-204ENST00000430328 GTF3C6Q969F1 213 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms