RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
RPE-206ENST00000429921 PLEKHG2Q9H7P9 1386 aa12.16□□□□□ -0.46
RPE-206ENST00000429921 TAF5LO75529 589 aa12.16□□□□□ -0.46
RPE-206ENST00000429921 METTL24Q5JXM2 366 aa12.16□□□□□ -0.46
RPE-206ENST00000429921 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
RPE-206ENST00000429921 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
RPE-206ENST00000429921 CNNM1Q9NRU3 951 aa12.16□□□□□ -0.46
RPE-206ENST00000429921 NSFL1CQ9UNZ2 370 aaKnown RBP12.16□□□□□ -0.46
RPE-206ENST00000429921 AHDC1Q5TGY3 1603 aaPredicted RBP12.16□□□□□ -0.46
RPE-206ENST00000429921 EP400Q96L91 3159 aa12.15□□□□□ -0.46
RPE-206ENST00000429921 CYP2E1P05181 493 aaPredicted RBP12.15□□□□□ -0.46
RPE-206ENST00000429921 DDX49Q9Y6V7 483 aaKnown RBP12.15□□□□□ -0.46
RPE-206ENST00000429921 NUCB2P80303 420 aa12.15□□□□□ -0.46
RPE-206ENST00000429921 CUL4AQ13619 759 aa12.15□□□□□ -0.46
RPE-206ENST00000429921 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.46
RPE-206ENST00000429921 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
RPE-206ENST00000429921 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
RPE-206ENST00000429921 WTIPA6NIX2 430 aaPredicted RBP12.14□□□□□ -0.47
RPE-206ENST00000429921 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 CWC22Q9HCG8 908 aaKnown RBP12.14□□□□□ -0.47
RPE-206ENST00000429921 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 TPCN1Q9ULQ1 816 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
RPE-206ENST00000429921 ZAP70P43403 619 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 CTSWP56202 376 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 ME3Q16798 604 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 TTLL5Q6EMB2 1281 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 LIMCH1Q9UPQ0 1083 aa12.14□□□□□ -0.47
RPE-206ENST00000429921 M0R2C6 588 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 ST3GAL1Q11201 340 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 HIP1O00291 1037 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 CSF1RP07333 972 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 LMBRD1Q9NUN5 540 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 MED23Q9ULK4 1368 aa12.13□□□□□ -0.47
RPE-206ENST00000429921 SLIT2O94813 1529 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 ANKRD18BA2A2Z9 1011 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
RPE-206ENST00000429921 MCM2P49736 904 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 FOSBP53539 338 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
RPE-206ENST00000429921 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
RPE-206ENST00000429921 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 CAVIN1Q6NZI2 390 aaKnown RBP12.12□□□□□ -0.47
RPE-206ENST00000429921 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
RPE-206ENST00000429921 GOLGA6L3A6NEY3 463 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 CYP21A2P08686 494 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 HAND2P61296 217 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 TAOK2Q9UL54 1235 aa12.12□□□□□ -0.47
RPE-206ENST00000429921 COL22A1Q8NFW1 1626 aaPredicted RBP12.12□□□□□ -0.47
RPE-206ENST00000429921 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPE-206ENST00000429921 BLOC1S2Q6QNY1 142 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 ZNF34Q8IZ26 560 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
RPE-206ENST00000429921 IQSEC3Q9UPP2 1182 aaPredicted RBP12.11□□□□□ -0.47
RPE-206ENST00000429921 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 NUP98P52948 1817 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 GJB2P29033 226 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 CCDC158Q5M9N0 1113 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 GPT2Q8TD30 523 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 SMC3Q9UQE7 1217 aa12.11□□□□□ -0.47
RPE-206ENST00000429921 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
RPE-206ENST00000429921 LRP6O75581 1613 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 CIAO1O76071 339 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 BRD1O95696 1058 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 MYH14Q7Z406 1995 aaKnown RBP12.1□□□□□ -0.47
RPE-206ENST00000429921 RPAP1Q9BWH6 1393 aaPredicted RBP12.1□□□□□ -0.47
RPE-206ENST00000429921 MAST3O60307 1309 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 PDE8AO60658 829 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 CAMTA2O94983 1202 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 MCAMP43121 646 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 PHKA1P46020 1223 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 AMIGO3Q86WK7 504 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 RAB11FIP4Q86YS3 637 aa12.1□□□□□ -0.47
RPE-206ENST00000429921 SRP68Q9UHB9 627 aaKnown RBP12.1□□□□□ -0.47
RPE-206ENST00000429921 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
RPE-206ENST00000429921 SYT1P21579 422 aa12.09□□□□□ -0.47
RPE-206ENST00000429921 TOB2Q14106 344 aaPredicted RBP12.09□□□□□ -0.47
RPE-206ENST00000429921 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
RPE-206ENST00000429921 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
RPE-206ENST00000429921 PUS7LQ9H0K6 701 aaKnown RBP12.09□□□□□ -0.47
RPE-206ENST00000429921 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
RPE-206ENST00000429921 USP21Q9UK80 565 aa12.09□□□□□ -0.47
RPE-206ENST00000429921 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
RPE-206ENST00000429921 NRAPQ86VF7 1730 aa12.09□□□□□ -0.47
RPE-206ENST00000429921 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
RPE-206ENST00000429921 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
RPE-206ENST00000429921 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
RPE-206ENST00000429921 Q6ZUG5 572 aa12.09□□□□□ -0.47
RPE-206ENST00000429921 STK11IPQ8N1F8 1099 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms