RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RPS8P62241 208 aaKnown RBP15.25■□□□□ 0.03
PTCH1-207ENST00000429896 RANBP6O60518 1105 aaKnown RBP15.24■□□□□ 0.03
PTCH1-207ENST00000429896 ZNF853P0CG23 659 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 TTC22Q5TAA0 569 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 SOGA3Q5TF21 947 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 PAG1Q9NWQ8 432 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 NF2P35240 595 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 DCTPP1Q9H773 170 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 VEZTQ9HBM0 779 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 SRP68Q9UHB9 627 aaKnown RBP15.24■□□□□ 0.03
PTCH1-207ENST00000429896 SIGLEC1Q9BZZ2 1709 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
PTCH1-207ENST00000429896 PDE4BQ07343 736 aa15.23■□□□□ 0.03
PTCH1-207ENST00000429896 STK3Q13188 491 aa15.23■□□□□ 0.03
PTCH1-207ENST00000429896 MARCH10Q8NA82 808 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-207ENST00000429896 TSR1Q2NL82 804 aaKnown RBP15.23■□□□□ 0.03
PTCH1-207ENST00000429896 CDKL5O76039 1030 aa15.23■□□□□ 0.03
PTCH1-207ENST00000429896 PLCG2P16885 1265 aa15.23■□□□□ 0.03
PTCH1-207ENST00000429896 BEND3Q5T5X7 828 aa15.23■□□□□ 0.03
PTCH1-207ENST00000429896 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
PTCH1-207ENST00000429896 GOLGA6L19H0YKK7 550 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 ADRA2BP18089 450 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 TAF5LO75529 589 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 PICALMQ13492 652 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 IQCA1Q86XH1 822 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 PDE1AP54750 535 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 JAG2Q9Y219 1238 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 ARHGEF28Q8N1W1 1705 aaKnown RBP15.22■□□□□ 0.03
PTCH1-207ENST00000429896 MAGEB6P1A0A0J9YX57 407 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 KLHDC4Q8TBB5 520 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 SLC4A4Q9Y6R1 1079 aa15.22■□□□□ 0.03
PTCH1-207ENST00000429896 A0A1B0GUL7 405 aa15.21■□□□□ 0.03
PTCH1-207ENST00000429896 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
PTCH1-207ENST00000429896 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
PTCH1-207ENST00000429896 ADAMTSL3P82987 1691 aa15.21■□□□□ 0.03
PTCH1-207ENST00000429896 LPIN2Q92539 896 aa15.21■□□□□ 0.03
PTCH1-207ENST00000429896 TNNI3KQ59H18 835 aa15.21■□□□□ 0.03
PTCH1-207ENST00000429896 DDX49Q9Y6V7 483 aaKnown RBP15.21■□□□□ 0.03
PTCH1-207ENST00000429896 FPGT-TNNI3KV9GXZ4 949 aa15.21■□□□□ 0.03
PTCH1-207ENST00000429896 BECN2A8MW95 431 aa15.21■□□□□ 0.02
PTCH1-207ENST00000429896 CASTP20810 708 aaKnown RBP15.21■□□□□ 0.02
PTCH1-207ENST00000429896 ERFEQ4G0M1 354 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 MAST3O60307 1309 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 HMGB1P09429 215 aaKnown RBP15.2■□□□□ 0.02
PTCH1-207ENST00000429896 SLC4A8Q2Y0W8 1093 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 XAGE2Q96GT9 111 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 FEZ1Q99689 392 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 USP32Q8NFA0 1604 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 PPEF1O14829 653 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-207ENST00000429896 KIF1AQ12756 1690 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 TNNI2P48788 182 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 BMP2KLQ5H9B9 411 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 CLEC4GQ6UXB4 293 aa15.2■□□□□ 0.02
PTCH1-207ENST00000429896 ZSCAN31Q96LW9 406 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-207ENST00000429896 ABCC4O15439 1325 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 COL15A1P39059 1388 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 CYP19A1P11511 503 aaPredicted RBP15.19■□□□□ 0.02
PTCH1-207ENST00000429896 CCDC96Q2M329 555 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 MAGEB6Q8N7X4 407 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 NARFQ9UHQ1 456 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 TPM2P07951 284 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 MMP10P09238 476 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 ATP2B4P23634 1241 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 NUCB2P80303 420 aa15.19■□□□□ 0.02
PTCH1-207ENST00000429896 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
PTCH1-207ENST00000429896 CCDC47Q96A33 483 aaKnown RBP15.19■□□□□ 0.02
PTCH1-207ENST00000429896 PDCP20941 246 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 MFSD6Q6ZSS7 791 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 SSFA2P28290 1259 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 WDR66Q8TBY9 1149 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 GNAT2P19087 354 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 TIMM10P62072 90 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 GSE1Q14687 1217 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 TMC4Q7Z404 712 aa15.18■□□□□ 0.02
PTCH1-207ENST00000429896 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
PTCH1-207ENST00000429896 TSPY2A6NKD2 308 aa15.17■□□□□ 0.02
PTCH1-207ENST00000429896 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
PTCH1-207ENST00000429896 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
PTCH1-207ENST00000429896 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
PTCH1-207ENST00000429896 WASF1Q92558 559 aa15.17■□□□□ 0.02
PTCH1-207ENST00000429896 CD163L1Q9NR16 1453 aa15.17■□□□□ 0.02
PTCH1-207ENST00000429896 NLRP10Q86W26 655 aa15.17■□□□□ 0.02
PTCH1-207ENST00000429896 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
PTCH1-207ENST00000429896 CTCFLQ8NI51 663 aaPredicted RBP15.16■□□□□ 0.02
PTCH1-207ENST00000429896 USP44Q9H0E7 712 aa15.16■□□□□ 0.02
PTCH1-207ENST00000429896 ARHGEF1Q92888 912 aaKnown RBP15.16■□□□□ 0.02
PTCH1-207ENST00000429896 NAP1L1P55209 391 aaKnown RBP15.16■□□□□ 0.02
PTCH1-207ENST00000429896 RNF123Q5XPI4 1314 aa15.16■□□□□ 0.02
PTCH1-207ENST00000429896 IFIT3O14879 490 aaKnown RBP15.16■□□□□ 0.02
PTCH1-207ENST00000429896 ZBTB7AO95365 584 aa15.16■□□□□ 0.02
PTCH1-207ENST00000429896 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
PTCH1-207ENST00000429896 CHMP5Q9NZZ3 219 aa15.16■□□□□ 0.02
PTCH1-207ENST00000429896 NRKQ7Z2Y5 1582 aa15.15■□□□□ 0.02
PTCH1-207ENST00000429896 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
PTCH1-207ENST00000429896 PIBF1Q8WXW3 757 aa15.15■□□□□ 0.02
PTCH1-207ENST00000429896 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
PTCH1-207ENST00000429896 HOOK1Q9UJC3 728 aaKnown RBP15.15■□□□□ 0.02
PTCH1-207ENST00000429896 PNMA6EA0A0J9YXQ4 647 aa15.15■□□□□ 0.02
PTCH1-207ENST00000429896 SKIDA1Q1XH10 827 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms