RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 DDX19AQ9NUU7 478 aaKnown RBP14.65□□□□□ -0.06
CDH3-202ENST00000429102 PEAK1Q9H792 1746 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 CCDC82Q8N4S0 544 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 GOLPH3LQ9H4A5 285 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 ZSCAN20P17040 1043 aaPredicted RBP14.64□□□□□ -0.07
CDH3-202ENST00000429102 TM6SF1Q9BZW5 370 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 SPTLC3Q9NUV7 552 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 CCDC69A6NI79 296 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 HIP1O00291 1037 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 GCKRQ14397 625 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 STOX1Q6ZVD7 989 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 THEMISQ8N1K5 641 aaPredicted RBP14.64□□□□□ -0.07
CDH3-202ENST00000429102 NEURL1BA8MQ27 555 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 PTPN14Q15678 1187 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 TNNI3KQ59H18 835 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 HOMER1Q86YM7 354 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 FPGT-TNNI3KV9GXZ4 949 aa14.64□□□□□ -0.07
CDH3-202ENST00000429102 APPP05067 770 aa14.63□□□□□ -0.07
CDH3-202ENST00000429102 NCBP1Q09161 790 aaKnown RBP14.63□□□□□ -0.07
CDH3-202ENST00000429102 GTF3C6Q969F1 213 aa14.63□□□□□ -0.07
CDH3-202ENST00000429102 ZNF215Q9UL58 517 aaPredicted RBP14.63□□□□□ -0.07
CDH3-202ENST00000429102 STK38Q15208 465 aa14.63□□□□□ -0.07
CDH3-202ENST00000429102 SMAP1Q8IYB5 467 aaPredicted RBP14.63□□□□□ -0.07
CDH3-202ENST00000429102 LMOD1P29536 600 aaPredicted RBP14.62□□□□□ -0.07
CDH3-202ENST00000429102 GNL2Q13823 731 aaKnown RBP14.62□□□□□ -0.07
CDH3-202ENST00000429102 DDX21Q9NR30 783 aaKnown RBP eCLIP14.62□□□□□ -0.07
CDH3-202ENST00000429102 CGNQ9P2M7 1197 aaKnown RBP14.62□□□□□ -0.07
CDH3-202ENST00000429102 ZNF790Q6PG37 636 aa14.62□□□□□ -0.07
CDH3-202ENST00000429102 TMC6Q7Z403 805 aa14.62□□□□□ -0.07
CDH3-202ENST00000429102 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
CDH3-202ENST00000429102 CFAP45Q9UL16 551 aa14.62□□□□□ -0.07
CDH3-202ENST00000429102 MCMDC2Q4G0Z9 681 aa14.62□□□□□ -0.07
CDH3-202ENST00000429102 ST7Q9NRC1 585 aa14.62□□□□□ -0.07
CDH3-202ENST00000429102 REREQ9P2R6 1566 aa14.62□□□□□ -0.07
CDH3-202ENST00000429102 CPLX1O14810 134 aa14.61□□□□□ -0.07
CDH3-202ENST00000429102 ELF2Q15723 593 aa14.61□□□□□ -0.07
CDH3-202ENST00000429102 PI16Q6UXB8 463 aa14.61□□□□□ -0.07
CDH3-202ENST00000429102 TBX22Q9Y458 520 aa14.61□□□□□ -0.07
CDH3-202ENST00000429102 RESTQ13127 1097 aa14.61□□□□□ -0.07
CDH3-202ENST00000429102 LRRC24Q50LG9 513 aa14.61□□□□□ -0.07
CDH3-202ENST00000429102 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 SPECC1Q5M775 1068 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 CREBRFQ8IUR6 639 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 CCAR2Q8N163 923 aaKnown RBP14.6□□□□□ -0.07
CDH3-202ENST00000429102 TPM3P06753 285 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 PTPN12Q05209 780 aaKnown RBP14.6□□□□□ -0.07
CDH3-202ENST00000429102 AIFM3Q96NN9 605 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 PUS3Q9BZE2 481 aaKnown RBP14.6□□□□□ -0.07
CDH3-202ENST00000429102 TOMM22Q9NS69 142 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 HDAC5Q9UQL6 1122 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 IFNKQ9P0W0 207 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 COL15A1P39059 1388 aa14.6□□□□□ -0.07
CDH3-202ENST00000429102 IFIT1P09914 478 aaKnown RBP14.59□□□□□ -0.07
CDH3-202ENST00000429102 TAF7LQ5H9L4 462 aa14.59□□□□□ -0.07
CDH3-202ENST00000429102 LRRC8AQ8IWT6 810 aa14.59□□□□□ -0.07
CDH3-202ENST00000429102 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
CDH3-202ENST00000429102 RICTORQ6R327 1708 aa14.59□□□□□ -0.07
CDH3-202ENST00000429102 SYT10Q6XYQ8 523 aa14.59□□□□□ -0.07
CDH3-202ENST00000429102 DENND2AQ9ULE3 1009 aa14.59□□□□□ -0.07
CDH3-202ENST00000429102 A1BGP04217 495 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 DPCR1Q3MIW9 517 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.08
CDH3-202ENST00000429102 NDUFA8P51970 172 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 TTLL7Q6ZT98 887 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 PDILTQ8N807 584 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 KRT32Q14532 448 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 PDIA6Q15084 440 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 STX1AQ16623 288 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 AMOTQ4VCS5 1084 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 PAG1Q9NWQ8 432 aa14.58□□□□□ -0.08
CDH3-202ENST00000429102 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
CDH3-202ENST00000429102 CDK11BP21127 795 aaKnown RBP14.57□□□□□ -0.08
CDH3-202ENST00000429102 DMTNQ08495 405 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 SYNE3Q6ZMZ3 975 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
CDH3-202ENST00000429102 CEP57L1Q8IYX8 460 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 MYL10Q9BUA6 226 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.57□□□□□ -0.08
CDH3-202ENST00000429102 CTDNEP1O95476 244 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 CABP4P57796 275 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 MTX1Q13505 466 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 EPC1Q9H2F5 836 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 PCDHA7Q9UN72 937 aa14.57□□□□□ -0.08
CDH3-202ENST00000429102 KLF18A0A0U1RQI7 1052 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 GOLGA8BA8MQT2 603 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 E7EWF7 191 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 ZBTB22O15209 634 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 PLA2G4DQ86XP0 818 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 LRRN4CLQ8ND94 238 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 INCENPQ9NQS7 918 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 SMTNL1A8MU46 457 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 ERCC6LQ2NKX8 1250 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 TDRD7Q8NHU6 1098 aaKnown RBP14.56□□□□□ -0.08
CDH3-202ENST00000429102 C8orf76Q96K31 380 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
CDH3-202ENST00000429102 CHMP4AQ9BY43 222 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 XPO4Q9C0E2 1151 aaKnown RBP14.56□□□□□ -0.08
CDH3-202ENST00000429102 ZSWIM4Q9H7M6 989 aa14.56□□□□□ -0.08
CDH3-202ENST00000429102 ORC3Q9UBD5 711 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms