RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SPATA32Q96LK8 384 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 TCEANC2Q96MN5 208 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 SLAIN2Q9P270 581 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 RFX7Q2KHR2 1363 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 C5P01031 1676 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 ZNF75DP51815 510 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 RESTQ13127 1097 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 GTF3C6Q969F1 213 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 FSD1Q9BTV5 496 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 BCCIPQ9P287 314 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDH13-202ENST00000428848 TNS3Q68CZ2 1445 aa10.4□□□□□ -0.74
CDH13-202ENST00000428848 CSB-PGBD3P0DP91 1061 aa10.4□□□□□ -0.74
CDH13-202ENST00000428848 KRT32Q14532 448 aa10.4□□□□□ -0.74
CDH13-202ENST00000428848 ZNF771Q7L3S4 317 aaPredicted RBP10.4□□□□□ -0.74
CDH13-202ENST00000428848 CCDC186Q7Z3E2 898 aa10.4□□□□□ -0.74
CDH13-202ENST00000428848 CKAP2LQ8IYA6 745 aa10.4□□□□□ -0.74
CDH13-202ENST00000428848 NLRP2Q9NX02 1062 aa10.4□□□□□ -0.74
CDH13-202ENST00000428848 TFIP11Q9UBB9 837 aaKnown RBP10.4□□□□□ -0.74
CDH13-202ENST00000428848 CCDC66A2RUB6 948 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 FAM177BA6PVY3 158 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 NR1I2O75469 434 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 CAVIN2O95810 425 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 CDK11BP21127 795 aaKnown RBP10.39□□□□□ -0.75
CDH13-202ENST00000428848 COPRSQ9NQ92 184 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 SCN11AQ9UI33 1791 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 JAK2O60674 1132 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 ATP5JP18859 108 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 CDC25BP30305 580 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 RFX5P48382 616 aaPredicted RBP10.39□□□□□ -0.75
CDH13-202ENST00000428848 ZC3H6P61129 1189 aaKnown RBP10.39□□□□□ -0.75
CDH13-202ENST00000428848 IFNL2Q8IZJ0 200 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 SMARCC2Q8TAQ2 1214 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 CGNQ9P2M7 1197 aaKnown RBP10.39□□□□□ -0.75
CDH13-202ENST00000428848 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
CDH13-202ENST00000428848 NEURL1BA8MQ27 555 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 U2AF2P26368 475 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDH13-202ENST00000428848 ADD1P35611 737 aaKnown RBP10.38□□□□□ -0.75
CDH13-202ENST00000428848 IQCB1Q15051 598 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 EPHA10Q5JZY3 1008 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 ZSCAN25Q6NSZ9 544 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 SARM1Q6SZW1 724 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 NEK1Q96PY6 1258 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 ZSCAN16Q9H4T2 348 aaPredicted RBP10.38□□□□□ -0.75
CDH13-202ENST00000428848 NRBP1Q9UHY1 535 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 CPDO75976 1380 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 GOLGA6L4A6NEF3 574 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 ZNF165P49910 485 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 FAM193AP78312 1265 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 LRMPQ12912 555 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 GCKRQ14397 625 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 KLHDC4Q8TBB5 520 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 BRF1Q92994 677 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 DBNLQ9UJU6 430 aaKnown RBP10.38□□□□□ -0.75
CDH13-202ENST00000428848 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
CDH13-202ENST00000428848 ZNF609O15014 1411 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 STK3Q13188 491 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 EDC3Q96F86 508 aaKnown RBP10.37□□□□□ -0.75
CDH13-202ENST00000428848 LLPHQ9BRT6 129 aaKnown RBP10.37□□□□□ -0.75
CDH13-202ENST00000428848 TRIM5Q9C035 493 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 SIL1Q9H173 461 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 DNAJC25Q9H1X3 360 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 SLC52A2Q9HAB3 445 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 RGPD5Q99666 1765 aa10.37□□□□□ -0.75
CDH13-202ENST00000428848 AFDNP55196 1824 aaKnown RBP10.37□□□□□ -0.75
CDH13-202ENST00000428848 SMTNL1A8MU46 457 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 CYP21A2P08686 494 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 RABL6Q3YEC7 729 aaPredicted RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 Q6ZUG5 572 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 CREBRFQ8IUR6 639 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 TTC5Q8N0Z6 440 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 CACTINQ8WUQ7 758 aaKnown RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 ZFP91Q96JP5 570 aaPredicted RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 METTL22Q9BUU2 404 aaPredicted RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 RCOR1Q9UKL0 485 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 U3KPZ7 1027 aaPredicted RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 COL18A1P39060 1754 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 SPATA31A3Q5VYP0 1347 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 ROBO1Q9Y6N7 1651 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 PFKFB2O60825 505 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 PTPN12Q05209 780 aaKnown RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 SCRN1Q12765 414 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 AIMP1Q12904 312 aaKnown RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 CCDC144BQ3MJ40 725 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 TNNI3KQ59H18 835 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 RIC3Q7Z5B4 369 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 CCDC144CPQ8IYA2 1237 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 BICD2Q8TD16 824 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 AGXT2Q9BYV1 514 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
CDH13-202ENST00000428848 CFAP45Q9UL16 551 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 FPGT-TNNI3KV9GXZ4 949 aa10.36□□□□□ -0.75
CDH13-202ENST00000428848 CTAGE5O15320 804 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 PHKG2P15735 406 aa10.35□□□□□ -0.75
CDH13-202ENST00000428848 RBM6P78332 1123 aaKnown RBP10.35□□□□□ -0.75
CDH13-202ENST00000428848 NCBP1Q09161 790 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms