RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 BRIP1Q9BX63 1249 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 RIMBP2O15034 1052 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 MAP3K9P80192 1104 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 PARP10Q53GL7 1025 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 CYP27B1O15528 508 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 ZFYVE27Q5T4F4 411 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 CWC25Q9NXE8 425 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-206ENST00000428680 HOOK1Q9UJC3 728 aaKnown RBP8.61□□□□□ -1.03
CNOT4-206ENST00000428680 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 B4DLN1 442 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 MMP10P09238 476 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 MRPL12P52815 198 aaKnown RBP8.6□□□□□ -1.03
CNOT4-206ENST00000428680 HSP90AB2PQ58FF8 381 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 DUSP27Q5VZP5 1158 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 RBM17Q96I25 401 aaKnown RBP8.6□□□□□ -1.03
CNOT4-206ENST00000428680 UTP14AQ9BVJ6 771 aaKnown RBP8.6□□□□□ -1.03
CNOT4-206ENST00000428680 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 ABT1Q9ULW3 272 aaKnown RBP8.6□□□□□ -1.03
CNOT4-206ENST00000428680 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 RNMTO43148 476 aaKnown RBP8.6□□□□□ -1.03
CNOT4-206ENST00000428680 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
CNOT4-206ENST00000428680 MATR3P43243 847 aaKnown RBP eCLIP8.6□□□□□ -1.031e-6■■■■□ 20.8
CNOT4-206ENST00000428680 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 ADAMTS7Q9UKP4 1686 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 TPM1P09493 284 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 ECE1P42892 770 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 DRC1Q96MC2 740 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 ZHX3Q9H4I2 956 aa8.6□□□□□ -1.03
CNOT4-206ENST00000428680 COL15A1P39059 1388 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 EPS15P42566 896 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 OTUD7BQ6GQQ9 843 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 AACSQ86V21 672 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 CUL5Q93034 780 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 GBP4Q96PP9 640 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 LRRC4BQ9NT99 713 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 SCN11AQ9UI33 1791 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 ZNF804AQ7Z570 1209 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 HOOK2Q96ED9 719 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 CCDC69A6NI79 296 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 ERVV-1B6SEH8 477 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 TXLNAP40222 546 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 FOSBP53539 338 aa8.59□□□□□ -1.03
CNOT4-206ENST00000428680 MAP2P11137 1827 aaKnown RBP8.59□□□□□ -1.03
CNOT4-206ENST00000428680 NPR1P16066 1061 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 PSMA5P28066 241 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 SLC39A6Q13433 755 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 CTNNA3Q9UI47 895 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 ADAMTS8Q9UP79 889 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 TUBGCP6Q96RT7 1819 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 OFD1O75665 1012 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 IPO7O95373 1038 aaKnown RBP8.58□□□□□ -1.04
CNOT4-206ENST00000428680 GSTO1P78417 241 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 PLS1Q14651 629 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
CNOT4-206ENST00000428680 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
CNOT4-206ENST00000428680 TSR2Q969E8 191 aaKnown RBP8.58□□□□□ -1.04
CNOT4-206ENST00000428680 MASTLQ96GX5 879 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 HOXB7P09629 217 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 PRKG1Q13976 671 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 DCTN1Q14203 1278 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 DNAI2Q9GZS0 605 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 SEC63Q9UGP8 760 aaKnown RBP8.58□□□□□ -1.04
CNOT4-206ENST00000428680 KIF7Q2M1P5 1343 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 CRKLP46109 303 aaKnown RBP8.58□□□□□ -1.04
CNOT4-206ENST00000428680 ZGPATQ8N5A5 531 aaKnown RBP8.58□□□□□ -1.04
CNOT4-206ENST00000428680 LNPKQ9C0E8 428 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 PDCL3Q9H2J4 239 aa8.58□□□□□ -1.04
CNOT4-206ENST00000428680 BRDTQ58F21 947 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-206ENST00000428680 DPP8Q6V1X1 898 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-206ENST00000428680 PICK1Q9NRD5 415 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 HEG1Q9ULI3 1381 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 A0A0U1RQG5 324 aaPredicted RBP8.57□□□□□ -1.04
CNOT4-206ENST00000428680 IL13P35225 146 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 ANKRD13DQ6ZTN6 518 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 UBE3BQ7Z3V4 1068 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 EHMT1Q9H9B1 1298 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 FOXD4L1Q9NU39 408 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 ARFGEF2Q9Y6D5 1785 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 SSBP05455 408 aaKnown RBP eCLIP8.57□□□□□ -1.04
CNOT4-206ENST00000428680 LINC00116Q8NCU8 138 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 PIBF1Q8WXW3 757 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 NAPBQ9H115 298 aa8.57□□□□□ -1.04
CNOT4-206ENST00000428680 EP400NLQ6ZTU2 488 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 NFATC2IPQ8NCF5 419 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 DLEC1Q9Y238 1755 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 PPIP5K2O43314 1243 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 THUMPD2Q9BTF0 503 aaKnown RBP8.56□□□□□ -1.04
CNOT4-206ENST00000428680 SCN7AQ01118 1682 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 KDM6AO15550 1401 aaPredicted RBP8.56□□□□□ -1.04
CNOT4-206ENST00000428680 TOGARAM1Q9Y4F4 1720 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 INTS3Q68E01 1043 aaKnown RBP8.56□□□□□ -1.04
CNOT4-206ENST00000428680 C2CD5Q86YS7 1000 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 PLCD3Q8N3E9 789 aa8.56□□□□□ -1.04
CNOT4-206ENST00000428680 SMCR8Q8TEV9 937 aaPredicted RBP8.56□□□□□ -1.04
CNOT4-206ENST00000428680 VPS37CA5D8V6 355 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms