RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 GGA1Q9UJY5 639 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
TRIM39-208ENST00000428555 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
TRIM39-208ENST00000428555 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-208ENST00000428555 MAP1SQ66K74 1059 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-208ENST00000428555 CNTROBQ8N137 903 aa12.03□□□□□ -0.48
TRIM39-208ENST00000428555 COL4A1P02462 1669 aa12.03□□□□□ -0.48
TRIM39-208ENST00000428555 PSMD14O00487 310 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 ECE2O60344 883 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 ITGA6P23229 1130 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 FOXO4P98177 505 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 SRCIN1Q9C0H9 1055 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 C9orf78Q9NZ63 289 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-208ENST00000428555 GPRC5DQ9NZD1 345 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-208ENST00000428555 TAF1P21675 1872 aa12.02□□□□□ -0.49
TRIM39-208ENST00000428555 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
TRIM39-208ENST00000428555 LAMB2P55268 1798 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 G3V3G9 751 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 GRM8O00222 908 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 ALDH1L1O75891 902 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 ATP2B4P23634 1241 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 IGHMBP2P38935 993 aaKnown RBP12.01□□□□□ -0.49
TRIM39-208ENST00000428555 FAM161AQ3B820 660 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 EPHA10Q5JZY3 1008 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-208ENST00000428555 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 ADARB2Q9NS39 739 aaKnown RBP12.01□□□□□ -0.49
TRIM39-208ENST00000428555 CNOT7Q9UIV1 285 aaKnown RBP12.01□□□□□ -0.49
TRIM39-208ENST00000428555 XDHP47989 1333 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 RTL9Q8NET4 1388 aa12.01□□□□□ -0.49
TRIM39-208ENST00000428555 SHTN1A0MZ66 631 aa12□□□□□ -0.49
TRIM39-208ENST00000428555 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
TRIM39-208ENST00000428555 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
TRIM39-208ENST00000428555 CHMP3Q9Y3E7 222 aa12□□□□□ -0.49
TRIM39-208ENST00000428555 PASKQ96RG2 1323 aa12□□□□□ -0.49
TRIM39-208ENST00000428555 PCNTO95613 3336 aa11.99□□□□□ -0.49
TRIM39-208ENST00000428555 H7C1D1 291 aa11.99□□□□□ -0.49
TRIM39-208ENST00000428555 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
TRIM39-208ENST00000428555 HIRAP54198 1017 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-208ENST00000428555 FMR1Q06787 632 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRIM39-208ENST00000428555 IFIT5Q13325 482 aaKnown RBP11.99□□□□□ -0.49
TRIM39-208ENST00000428555 DPF2Q92785 391 aa11.99□□□□□ -0.49
TRIM39-208ENST00000428555 DUOX1Q9NRD9 1551 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 VIL1P09327 827 aaKnown RBP11.98□□□□□ -0.49
TRIM39-208ENST00000428555 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-208ENST00000428555 ALDH1L2Q3SY69 923 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
TRIM39-208ENST00000428555 TXNRD3Q86VQ6 643 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 MICALL2Q8IY33 904 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-208ENST00000428555 SUCLG2Q96I99 432 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 ZNF594Q96JF6 807 aaPredicted RBP11.98□□□□□ -0.49
TRIM39-208ENST00000428555 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 SMC4Q9NTJ3 1288 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
TRIM39-208ENST00000428555 PTPRCP08575 1304 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 TMEM88BA6NKF7 163 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 SNAP23O00161 211 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 TAF5LO75529 589 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 CHRNDQ07001 517 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 PODNQ7Z5L7 613 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 TRPM4Q8TD43 1214 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 KAZALD1Q96I82 304 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
TRIM39-208ENST00000428555 PGAP2Q9UHJ9 254 aa11.97□□□□□ -0.49
TRIM39-208ENST00000428555 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.49
TRIM39-208ENST00000428555 TRAF5O00463 557 aa11.96□□□□□ -0.49
TRIM39-208ENST00000428555 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.49
TRIM39-208ENST00000428555 CCDC57Q2TAC2 916 aa11.96□□□□□ -0.49
TRIM39-208ENST00000428555 TBC1D10BQ4KMP7 808 aaPredicted RBP11.96□□□□□ -0.49
TRIM39-208ENST00000428555 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.49
TRIM39-208ENST00000428555 JMYQ8N9B5 988 aa11.96□□□□□ -0.49
TRIM39-208ENST00000428555 USP44Q9H0E7 712 aa11.96□□□□□ -0.49
TRIM39-208ENST00000428555 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.49
TRIM39-208ENST00000428555 SCN4AP35499 1836 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 UTYO14607 1347 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 USP17L3A6NCW0 530 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 USP17L4A6NCW7 530 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 PLIN1O60240 522 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 EGFRP00533 1210 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 CT47B1P0C2W7 299 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-208ENST00000428555 KLRK1P26718 216 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 KCNJ4P48050 445 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 RARSP54136 660 aaKnown RBP11.95□□□□□ -0.5
TRIM39-208ENST00000428555 TAF7LQ5H9L4 462 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-208ENST00000428555 LDHAL6AQ6ZMR3 332 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 USP17L1Q7RTZ2 530 aa11.95□□□□□ -0.5
TRIM39-208ENST00000428555 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
TRIM39-208ENST00000428555 GLIS2Q9BZE0 524 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-208ENST00000428555 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
TRIM39-208ENST00000428555 CST9Q5W186 159 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 DLK2Q6UY11 383 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 USP48Q86UV5 1035 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms