RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ERCC4Q92889 916 aaPredicted RBP11.23□□□□□ -0.61
SNX13-203ENST00000428135 TSPYL1Q9H0U9 437 aa11.23□□□□□ -0.61
SNX13-203ENST00000428135 NMIQ13287 307 aaPredicted RBP11.22□□□□□ -0.61
SNX13-203ENST00000428135 WDR70Q9NW82 654 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 RBM8AQ9Y5S9 174 aaKnown RBP11.22□□□□□ -0.61
SNX13-203ENST00000428135 H0YHG0 523 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 DESP17661 470 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 MCM5P33992 734 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 UBA7P41226 1012 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 PAG1Q9NWQ8 432 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 CCDC40Q4G0X9 1142 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 Q6ZUG5 572 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 G2E3Q7L622 706 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 NYXQ9GZU5 481 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 METP08581 1390 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 CCDC112Q8NEF3 446 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 MAP7D2Q96T17 732 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 RAB3GAP1Q15042 981 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 PLIN2Q99541 437 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 BCS1LQ9Y276 419 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 TRPM2O94759 1503 aa11.22□□□□□ -0.61
SNX13-203ENST00000428135 GOLGA6L10A6NI86 522 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 ZBTB43O43298 467 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 TAF5LO75529 589 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 MARCKSP29966 332 aaPredicted RBP11.21□□□□□ -0.61
SNX13-203ENST00000428135 CCDC178Q5BJE1 867 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 STX6O43752 255 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 HMGN5P82970 282 aaKnown RBP11.21□□□□□ -0.61
SNX13-203ENST00000428135 DPH6Q7L8W6 267 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
SNX13-203ENST00000428135 TRIM21P19474 475 aaKnown RBP11.21□□□□□ -0.61
SNX13-203ENST00000428135 TIMM10P62072 90 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 SPA17Q15506 151 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 DRC1Q96MC2 740 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 CCDC113Q9H0I3 377 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 NDUFB9Q9Y6M9 179 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 MAGI3Q5TCQ9 1506 aa11.21□□□□□ -0.61
SNX13-203ENST00000428135 PRC1O43663 620 aa11.21□□□□□ -0.62
SNX13-203ENST00000428135 UFL1O94874 794 aa11.21□□□□□ -0.62
SNX13-203ENST00000428135 TNPO1Q92973 898 aaKnown RBP11.21□□□□□ -0.62
SNX13-203ENST00000428135 ALG1Q9BT22 464 aa11.21□□□□□ -0.62
SNX13-203ENST00000428135 CNBD1Q8NA66 436 aa11.21□□□□□ -0.62
SNX13-203ENST00000428135 TRPC5Q9UL62 973 aaPredicted RBP11.21□□□□□ -0.62
SNX13-203ENST00000428135 PDE1AP54750 535 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 NAPAP54920 295 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 RTN1Q16799 776 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 SCAND2PQ9GZW5 306 aaPredicted RBP11.2□□□□□ -0.62
SNX13-203ENST00000428135 BIN2Q9UBW5 565 aaPredicted RBP11.2□□□□□ -0.62
SNX13-203ENST00000428135 MAP3K5Q99683 1374 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 TOP1P11387 765 aaKnown RBP11.2□□□□□ -0.62
SNX13-203ENST00000428135 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 CCDC150Q8NCX0 1101 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 ANO10Q9NW15 660 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 IL15P40933 162 aaPredicted RBP11.2□□□□□ -0.62
SNX13-203ENST00000428135 CCDC12Q8WUD4 166 aaPredicted RBP11.2□□□□□ -0.62
SNX13-203ENST00000428135 GOPCQ9HD26 462 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 USP25Q9UHP3 1055 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 TTC37Q6PGP7 1564 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 MYO5CQ9NQX4 1742 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 KIF20AO95235 890 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 CCDC129Q6ZRS4 1044 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 ESR2Q92731 530 aa11.2□□□□□ -0.62
SNX13-203ENST00000428135 LDHBP07195 334 aaKnown RBP11.19□□□□□ -0.62
SNX13-203ENST00000428135 ANAPC15P60006 121 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 ZBTB9Q96C00 473 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 CCDC183Q5T5S1 534 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 ASXL1Q8IXJ9 1541 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 SAMD9Q5K651 1589 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 PRPF4BQ13523 1007 aaKnown RBP11.19□□□□□ -0.62
SNX13-203ENST00000428135 SMARCC2Q8TAQ2 1214 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 RLBP1P12271 317 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 NUCB1Q02818 461 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 JAKMIP3Q5VZ66 844 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 ATP8B2P98198 1209 aa11.19□□□□□ -0.62
SNX13-203ENST00000428135 MAST1Q9Y2H9 1570 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 APOBRQ0VD83 1088 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 ZGPATQ8N5A5 531 aaKnown RBP11.18□□□□□ -0.62
SNX13-203ENST00000428135 LMOD1P29536 600 aaPredicted RBP11.18□□□□□ -0.62
SNX13-203ENST00000428135 TCP10Q12799 353 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 FNBP4Q8N3X1 1017 aaPredicted RBP11.18□□□□□ -0.62
SNX13-203ENST00000428135 FERMT2Q96AC1 680 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 CLIP2Q9UDT6 1046 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 CPA1P15085 419 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 SFPQP23246 707 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX13-203ENST00000428135 TNNI2P48788 182 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 RGS22Q8NE09 1264 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 PLCD4Q9BRC7 762 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 ITGA6P23229 1130 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 EAPPQ56P03 285 aaPredicted RBP11.18□□□□□ -0.62
SNX13-203ENST00000428135 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 KRT23Q9C075 422 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 NF2P35240 595 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 TERF1P54274 439 aa11.18□□□□□ -0.62
SNX13-203ENST00000428135 ZNF772Q68DY9 489 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms