RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ATP2C2O75185 946 aa15.1■□□□□ 0.01
SPG11-202ENST00000427534 HCLS1P14317 486 aaPredicted RBP15.09■□□□□ 0.01
SPG11-202ENST00000427534 TNNI2P48788 182 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 ERLIN1O75477 346 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 RRAGBQ5VZM2 374 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 C16orf45Q96MC5 204 aaPredicted RBP15.09■□□□□ 0.01
SPG11-202ENST00000427534 ECHDC1Q9NTX5 307 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 GSTO1P78417 241 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 CCDC91Q7Z6B0 441 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 ZNF830Q96NB3 372 aaPredicted RBP15.09■□□□□ 0.01
SPG11-202ENST00000427534 FAM107BQ9H098 131 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 KIF5CO60282 957 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 SFPQP23246 707 aaKnown RBP eCLIP15.09■□□□□ 0.01
SPG11-202ENST00000427534 PTPRKQ15262 1439 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 VPS36Q86VN1 386 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 IL16Q14005 1332 aa15.09■□□□□ 0.01
SPG11-202ENST00000427534 ERCC3P19447 782 aa15.08■□□□□ 0.01
SPG11-202ENST00000427534 MCM7P33993 719 aa15.08■□□□□ 0.01
SPG11-202ENST00000427534 IQCEQ6IPM2 695 aa15.08■□□□□ 0.01
SPG11-202ENST00000427534 STAT6P42226 847 aa15.08■□□□□ 0
SPG11-202ENST00000427534 PABPN1LA6NDY0 278 aaKnown RBP15.08■□□□□ 0
SPG11-202ENST00000427534 IRS4O14654 1257 aaPredicted RBP15.08■□□□□ 0
SPG11-202ENST00000427534 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
SPG11-202ENST00000427534 JADE2Q9NQC1 790 aa15.08■□□□□ 0
SPG11-202ENST00000427534 TNNQ9UQP3 1299 aa15.08■□□□□ 0
SPG11-202ENST00000427534 Q6ZUG5 572 aa15.08■□□□□ 0
SPG11-202ENST00000427534 ANO10Q9NW15 660 aa15.08■□□□□ 0
SPG11-202ENST00000427534 MPHOSPH6Q99547 160 aaKnown RBP15.07■□□□□ 0
SPG11-202ENST00000427534 SH2B1Q9NRF2 756 aaPredicted RBP15.07■□□□□ 0
SPG11-202ENST00000427534 LIMCH1Q9UPQ0 1083 aa15.07■□□□□ 0
SPG11-202ENST00000427534 EEF2P13639 858 aaKnown RBP15.07■□□□□ 0
SPG11-202ENST00000427534 TMCO3Q6UWJ1 677 aa15.07■□□□□ 0
SPG11-202ENST00000427534 BACH1O14867 736 aa15.07■□□□□ 0
SPG11-202ENST00000427534 ALG1Q9BT22 464 aa15.07■□□□□ 0
SPG11-202ENST00000427534 KDM5BQ9UGL1 1544 aa15.07■□□□□ 0
SPG11-202ENST00000427534 IGHDP01880 384 aa15.07■□□□□ 0
SPG11-202ENST00000427534 GIMAP6Q6P9H5 292 aa15.07■□□□□ 0
SPG11-202ENST00000427534 TBC1D2Q9BYX2 928 aa15.07■□□□□ 0
SPG11-202ENST00000427534 RNF187Q5TA31 235 aaPredicted RBP15.06■□□□□ 0
SPG11-202ENST00000427534 CBX1P83916 185 aa15.06■□□□□ 0
SPG11-202ENST00000427534 TFCP2Q12800 502 aa15.06■□□□□ 0
SPG11-202ENST00000427534 SPECC1Q5M775 1068 aa15.06■□□□□ 0
SPG11-202ENST00000427534 CRACR2AQ9BSW2 395 aa15.06■□□□□ 0
SPG11-202ENST00000427534 IL2RBP14784 551 aa15.06■□□□□ 0
SPG11-202ENST00000427534 TRAPPC3LQ5T215 181 aa15.06■□□□□ 0
SPG11-202ENST00000427534 TICAM2Q86XR7 235 aa15.06■□□□□ 0
SPG11-202ENST00000427534 TEX13AQ9BXU3 409 aaPredicted RBP15.06■□□□□ 0
SPG11-202ENST00000427534 TAF5LO75529 589 aa15.06■□□□□ 0
SPG11-202ENST00000427534 DHX58Q96C10 678 aa15.06■□□□□ 0
SPG11-202ENST00000427534 PPIP5K1Q6PFW1 1433 aa15.06■□□□□ 0
SPG11-202ENST00000427534 UFL1O94874 794 aa15.06■□□□□ 0
SPG11-202ENST00000427534 PTPN14Q15678 1187 aa15.06■□□□□ 0
SPG11-202ENST00000427534 FCHSD1Q86WN1 690 aa15.06■□□□□ 0
SPG11-202ENST00000427534 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
SPG11-202ENST00000427534 EIF3JO75822 258 aaKnown RBP15.05■□□□□ 0
SPG11-202ENST00000427534 RTN1Q16799 776 aa15.05■□□□□ 0
SPG11-202ENST00000427534 MAATS1Q7Z4T9 603 aa15.05■□□□□ 0
SPG11-202ENST00000427534 CCDC12Q8WUD4 166 aaPredicted RBP15.05■□□□□ 0
SPG11-202ENST00000427534 UBXN4Q92575 508 aa15.05■□□□□ 0
SPG11-202ENST00000427534 NDUFB9Q9Y6M9 179 aa15.05■□□□□ 0
SPG11-202ENST00000427534 YEATS4O95619 227 aa15.05■□□□□ 0
SPG11-202ENST00000427534 STX6O43752 255 aa15.05■□□□□ -0
SPG11-202ENST00000427534 BMP2KLQ5H9B9 411 aa15.05■□□□□ -0
SPG11-202ENST00000427534 FAM89AQ96GI7 184 aa15.05■□□□□ -0
SPG11-202ENST00000427534 ZNF594Q96JF6 807 aaPredicted RBP15.05■□□□□ -0
SPG11-202ENST00000427534 CCNL1Q9UK58 526 aaPredicted RBP15.05■□□□□ -0
SPG11-202ENST00000427534 NOD1Q9Y239 953 aa15.05■□□□□ -0
SPG11-202ENST00000427534 TNRQ92752 1358 aa15.05■□□□□ -0
SPG11-202ENST00000427534 SMIM23A6NLE4 172 aa15.05■□□□□ -0
SPG11-202ENST00000427534 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
SPG11-202ENST00000427534 CETN1Q12798 172 aa15.05■□□□□ -0
SPG11-202ENST00000427534 ZBTB43O43298 467 aa15.04■□□□□ -0
SPG11-202ENST00000427534 STX17P56962 302 aa15.04■□□□□ -0
SPG11-202ENST00000427534 CCDC183Q5T5S1 534 aa15.04■□□□□ -0
SPG11-202ENST00000427534 PHAXQ9H814 394 aaKnown RBP15.04■□□□□ -0
SPG11-202ENST00000427534 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
SPG11-202ENST00000427534 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
SPG11-202ENST00000427534 CNPY2Q9Y2B0 182 aa15.04■□□□□ -0
SPG11-202ENST00000427534 APBA3O96018 575 aa15.04■□□□□ -0
SPG11-202ENST00000427534 MYCLP12524 364 aaPredicted RBP15.04■□□□□ -0
SPG11-202ENST00000427534 CCDC50Q8IVM0 306 aa15.04■□□□□ -0
SPG11-202ENST00000427534 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
SPG11-202ENST00000427534 GPR162Q16538 588 aa15.04■□□□□ -0
SPG11-202ENST00000427534 FAM182BQ5T319 152 aa15.04■□□□□ -0
SPG11-202ENST00000427534 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
SPG11-202ENST00000427534 KLHDC4Q8TBB5 520 aa15.04■□□□□ -0
SPG11-202ENST00000427534 NMIQ13287 307 aaPredicted RBP15.04■□□□□ -0
SPG11-202ENST00000427534 SCAND2PQ9GZW5 306 aaPredicted RBP15.04■□□□□ -0
SPG11-202ENST00000427534 PLCH2O75038 1416 aa15.04■□□□□ -0
SPG11-202ENST00000427534 RALGAPBQ86X10 1494 aa15.04■□□□□ -0
SPG11-202ENST00000427534 USH1GQ495M9 461 aa15.03■□□□□ -0
SPG11-202ENST00000427534 LRSAM1Q6UWE0 723 aa15.03■□□□□ -0
SPG11-202ENST00000427534 INCENPQ9NQS7 918 aa15.03■□□□□ -0
SPG11-202ENST00000427534 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
SPG11-202ENST00000427534 PIK3R4Q99570 1358 aa15.03■□□□□ -0
SPG11-202ENST00000427534 FGFR1OPO95684 399 aaKnown RBP15.03■□□□□ -0
SPG11-202ENST00000427534 AMPD3Q01432 767 aa15.03■□□□□ -0
SPG11-202ENST00000427534 APOBRQ0VD83 1088 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms