RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.44
LSG1-202ENST00000427461 U2SURPO15042 1029 aaKnown RBP12.33□□□□□ -0.44
LSG1-202ENST00000427461 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
LSG1-202ENST00000427461 MYL6BP14649 208 aa12.33□□□□□ -0.44
LSG1-202ENST00000427461 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
LSG1-202ENST00000427461 MCM10Q7L590 875 aa12.33□□□□□ -0.44
LSG1-202ENST00000427461 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
LSG1-202ENST00000427461 ZNF333Q96JL9 665 aa12.33□□□□□ -0.44
LSG1-202ENST00000427461 LRRC37AA6NMS7 1700 aa12.33□□□□□ -0.44
LSG1-202ENST00000427461 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.44
LSG1-202ENST00000427461 ZNF609O15014 1411 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
LSG1-202ENST00000427461 VIL1P09327 827 aaKnown RBP12.32□□□□□ -0.44
LSG1-202ENST00000427461 GRAPQ13588 217 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 PRKG1Q13976 671 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 DCTN1Q14203 1278 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 GRAPLQ8TC17 118 aaPredicted RBP12.32□□□□□ -0.44
LSG1-202ENST00000427461 LRCH3Q96II8 777 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
LSG1-202ENST00000427461 POLLQ9UGP5 575 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 NSFL1CQ9UNZ2 370 aaKnown RBP12.32□□□□□ -0.44
LSG1-202ENST00000427461 KDM3BQ7LBC6 1761 aa12.32□□□□□ -0.44
LSG1-202ENST00000427461 DDX60Q8IY21 1712 aaKnown RBP12.31□□□□□ -0.44
LSG1-202ENST00000427461 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
LSG1-202ENST00000427461 ZNF280AP59817 542 aaPredicted RBP12.31□□□□□ -0.44
LSG1-202ENST00000427461 SLC4A8Q2Y0W8 1093 aa12.31□□□□□ -0.44
LSG1-202ENST00000427461 GIGYF2Q6Y7W6 1299 aaKnown RBP12.31□□□□□ -0.44
LSG1-202ENST00000427461 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
LSG1-202ENST00000427461 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
LSG1-202ENST00000427461 ERO1AQ96HE7 468 aa12.31□□□□□ -0.44
LSG1-202ENST00000427461 UTP14AQ9BVJ6 771 aaKnown RBP12.31□□□□□ -0.44
LSG1-202ENST00000427461 COL25A1Q9BXS0 654 aaPredicted RBP12.31□□□□□ -0.44
LSG1-202ENST00000427461 PRO3102Q9H379 93 aa12.31□□□□□ -0.44
LSG1-202ENST00000427461 EFCC1Q9HA90 598 aa12.31□□□□□ -0.44
LSG1-202ENST00000427461 LAMA3Q16787 3333 aa12.31□□□□□ -0.44
LSG1-202ENST00000427461 COL4A1P02462 1669 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 IGF2BP3O00425 579 aaKnown RBP eCLIP12.3□□□□□ -0.44
LSG1-202ENST00000427461 ALDH1A1P00352 501 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 GPSM2P81274 684 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 DPF3Q92784 378 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 ZNF428Q96B54 188 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 FZD1Q9UP38 647 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
LSG1-202ENST00000427461 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
LSG1-202ENST00000427461 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
LSG1-202ENST00000427461 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
LSG1-202ENST00000427461 MYOZ2Q9NPC6 264 aa12.29□□□□□ -0.44
LSG1-202ENST00000427461 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
LSG1-202ENST00000427461 CRHR2Q13324 411 aa12.28□□□□□ -0.44
LSG1-202ENST00000427461 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
LSG1-202ENST00000427461 SLC9C1Q4G0N8 1177 aa12.28□□□□□ -0.44
LSG1-202ENST00000427461 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
LSG1-202ENST00000427461 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
LSG1-202ENST00000427461 PRKAR2BP31323 418 aa12.27□□□□□ -0.45
LSG1-202ENST00000427461 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
LSG1-202ENST00000427461 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
LSG1-202ENST00000427461 MANSC4A6NHS7 340 aaPredicted RBP12.26□□□□□ -0.45
LSG1-202ENST00000427461 SP3Q02447 781 aa12.26□□□□□ -0.45
LSG1-202ENST00000427461 LDLRAD1Q5T700 205 aa12.26□□□□□ -0.45
LSG1-202ENST00000427461 AGBL3Q8NEM8 1001 aa12.26□□□□□ -0.45
LSG1-202ENST00000427461 TBC1D16Q8TBP0 767 aa12.26□□□□□ -0.45
LSG1-202ENST00000427461 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
LSG1-202ENST00000427461 GMLQ99445 158 aa12.26□□□□□ -0.45
LSG1-202ENST00000427461 USP17L8P0C7I0 530 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 NF2P35240 595 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 ARMC9Q7Z3E5 817 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 EYA3Q99504 573 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 ANGEL1Q9UNK9 670 aaKnown RBP12.25□□□□□ -0.45
LSG1-202ENST00000427461 PSME4Q14997 1843 aa12.25□□□□□ -0.45
LSG1-202ENST00000427461 ZSWIM8A7E2V4 1837 aa12.24□□□□□ -0.45
LSG1-202ENST00000427461 INHBEP58166 350 aa12.24□□□□□ -0.45
LSG1-202ENST00000427461 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
LSG1-202ENST00000427461 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
LSG1-202ENST00000427461 SHISA4Q96DD7 197 aa12.24□□□□□ -0.45
LSG1-202ENST00000427461 CLMNQ96JQ2 1002 aa12.24□□□□□ -0.45
LSG1-202ENST00000427461 ZC3H12CQ9C0D7 883 aaKnown RBP12.24□□□□□ -0.45
LSG1-202ENST00000427461 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
LSG1-202ENST00000427461 LAMB1P07942 1786 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 G3V3G9 751 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 ANXA1P04083 346 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 CC2D1BQ5T0F9 858 aaKnown RBP12.23□□□□□ -0.45
LSG1-202ENST00000427461 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 Q7L0L9 218 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 SLC10A4Q96EP9 437 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 WNK4Q96J92 1243 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 PTPN18Q99952 460 aa12.23□□□□□ -0.45
LSG1-202ENST00000427461 TRMT112Q9UI30 125 aaKnown RBP12.23□□□□□ -0.45
LSG1-202ENST00000427461 VCANP13611 3396 aa12.22□□□□□ -0.45
LSG1-202ENST00000427461 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
LSG1-202ENST00000427461 WNT10BO00744 389 aa12.22□□□□□ -0.45
LSG1-202ENST00000427461 LRP10Q7Z4F1 713 aa12.22□□□□□ -0.45
LSG1-202ENST00000427461 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
LSG1-202ENST00000427461 SASH1O94885 1247 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms